Information on SUBCLASS 6.1.1 |
Subclass Accession number: 7968
Subclass: 6.1.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 16 Average sequence ID (%) : 21.1 +/- 22.1 Average RMSD (Å) : 0.631 +/- 0.125 Consensus geometry
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Consensus Sequence: | XXXXXXXGXX |
(φψ)-conformation: | bppaabpgbb |
Pattern: | x | [adepqs] | x | [dekpqrt] | [hknprst] | x | x | [GN] | x | [efkmy] | x | [aily] |
Conservation: | 0.017 | 0.203 | -0.442 | -0.320 | -0.516 | -0.419 | 0.198 | 2.991 | -0.874 | -0.225 | -0.646 | 0.033 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a81_A_38 | 1a81 | A | 42 | 53 | RQSRNYLGGFAL | EE-SSSTT-EEE | bxxaNbpUxbbb |
1amu_A_396 | 1amu | A | 398 | 409 | VDNPFVPGEKLY | EE-SSSTTSEEE | xxxaabpgxbbx |
1c0a_A_177 | 1c0a | A | 178 | 189 | VPSRVHKGKFYA | EE-SSSTT-EEE | bxxaabpvbbxb |
1fmk_*_171 | 1fmk | - | 175 | 186 | RESETTKGAYCL | EE-SSSTT-EEE | bxxaabxgxbbb |
1gzg_A_51 | 1gzg | A | 52 | 63 | ESIPSMPGVERL | EE-TTSTT-EEE | bxbaabpvbbxb |
1h7n_A_54 | 1h7n | A | 55 | 66 | TEIDSLPNINRI | EE-TTSTT-EEE | xxbaabpvbbxb |
1jwo_A_144 | 1jwo | A | 147 | 158 | RESARHPGDYVL | EE-SSSTT-EEE | bxxaabxvbbbx |
1khb_A_67 | 1khb | A | 67 | 78 | RRLKKYDNCWLA | EE-TTSBS-EEE | bxbaabxlbbbb |
1l0w_A_183 | 1l0w | A | 184 | 195 | VPYRHEPGLFYA | EE-TTSTT-EEE | bpxaabpvbbbb |
1l6s_A_44 | 1l6s | A | 44 | 55 | KAVEAMPGVMRI | EE-TTSTT-EEE | bxxaabpgxbxx |
1lkk_A_151 | 1lkk | A | 154 | 165 | RESESTAGSFSL | EE-SSSTT-EEE | bpxaabpvbbbb |
1m61_A_34 | 1m61 | A | 37 | 48 | RQCLRSLGGYVL | EE-SSBTT-EEE | bxxaaxpvxbbx |
1pv8_A_44 | 1pv8 | A | 45 | 56 | QPITSLPGVARY | EE-SSSTT-EEE | xpxaaxpvbbxb |
1qcf_A_172 | 1qcf | A | 175 | 186 | RDSETTKGSYSL | EE-SSSTTSEEE | bxxaabpgxbbb |
2shp_A_134 | 2shp | A | 138 | 149 | RESQSHPGDFVL | EE-SSSTT-EEE | bxxaaxxgxbbb |
3tgl_*_96 | 3tgl | - | 97 | 108 | VSYPPVSGTKVH | EE-TTSTT-EEE | bxxaabxvbbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HA.8.0 |