Information on SUBCLASS 6.20.1 |
Subclass Accession number: 6455
Subclass: 6.20.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 21.3 +/- 28.3 Average RMSD (Å) : 0.967 +/- 0.480 Consensus geometry
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Consensus Sequence: | XpXGpXpXXp |
(φψ)-conformation: | bbpgbappbb |
Pattern: | [mtv] | x | [ht] | x | [hps] | [EKRS] | x | [G] | [EGS] | [ANS] | [DEHKS] | [ekpt] | x | [EQRT] | x |
Conservation: | -0.414 | -0.736 | 0.050 | -0.393 | -0.417 | 0.109 | -0.624 | 3.230 | 0.169 | 0.420 | -0.108 | -0.856 | -0.411 | -0.020 | -1.000 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dlc_*_356 | 1dlc | - | 364 | 377 | VSTRPSIGSNDIIT. | EEEEESTT----EE. | bbbbxxpgbaxxxb. |
1fna_*_31 | 1fna | - | 33 | 47 | RITYGETGGNSPVQE | EEEEEETT--S--EE | bbbbbxxvxaxxxxb |
1ji6_A_357 | 1ji6 | A | 365 | 378 | VETRPSIGSSKTIT. | EEEEESTT----EE. | bbbbpxpgbapxbx. |
1lar_A_1462 | 1lar | A | 1466 | 1480 | TFALHKSGSSEKREL | EEEEEETTS--EEEE | bbbbbbpgbapbbbb |
1m4k_A_136 | 1m4k | A | 136 | 150 | MYHLSREGEAHERRF | EEEEEETT-S--EEE | bbbbbbpvbaxbbbb |
1nkr_*_136 | 1nkr | - | 136 | 150 | MYHLSREGEAHERRL | EEEEEETT-SS-EEE | bbbbbbpvbabxxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1m4k_A_136 | 1m4k | A | EGLETHYLENE GLYCOL | G - 143 |
1m4k_A_136 | 1m4k | A | EGLETHYLENE GLYCOL | E - 144 |
1m4k_A_136 | 1m4k | A | EGLETHYLENE GLYCOL | A - 145 |
1m4k_A_136 | 1m4k | A | EGLETHYLENE GLYCOL | H - 146 |
Clusters included in this Subclass |
CLUSTER: HA.5.207 |
CLUSTER: HA.6.81 |