Information on SUBCLASS 6.7.1 |
Subclass Accession number: 7976
Subclass: 6.7.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 15.0 +/- 13.9 Average RMSD (Å) : 0.580 +/- 0.164 Consensus geometry
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Consensus Sequence: | hhXpXcGhhX |
(φψ)-conformation: | bbpbaaepbb |
Pattern: | x | [ACVY] | x | [hst] | x | [DKNR] | [G] | [fpw] | [AIVY] | x |
Conservation: | -0.556 | -0.117 | -0.728 | -0.123 | -0.599 | 0.284 | 2.694 | -0.498 | 0.068 | -0.426 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1iye_A_39 | 1iye | A | 41 | 50 | CYDSHKGPVV | EE--TTSSEE | bbxbaaepbx |
1k0i_A_200 | 1k0i | A | 201 | 210 | YANHPRGFAL | EE--TT--EE | xbbbaaexbb |
1k4g_A_292 | 1k4g | A | 292 | 301 | QAFTWDGPIN | EE--TT--EE | xbxbaaexbx |
1m3k_A_202 | 1m3k | A | 203 | 212 | IVKGRKGDIT | EE--TT--EE | xxxbaaexbx |
1qmy_A_148 | 1qmy | A | 152 | 161 | ACVTSNGWYA | EE--TTSSEE | bbxbaaepbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1iye_A_39 | 1iye | A | PGU4-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-BUTYRIC ACID | I - 39 |
1k0i_A_200 | 1k0i | A | PHBP-HYDROXYBENZOIC ACID | Y - 201 |
1k0i_A_200 | 1k0i | A | PHBP-HYDROXYBENZOIC ACID | L - 210 |
1k0i_A_200 | 1k0i | A | PHBP-HYDROXYBENZOIC ACID | S - 212 |
1k0i_A_200 | 1k0i | A | PHBP-HYDROXYBENZOIC ACID | Q - 213 |
1k0i_A_200 | 1k0i | A | PHBP-HYDROXYBENZOIC ACID | R - 214 |
Clusters included in this Subclass |
CLUSTER: HA.5.114 |
CLUSTER: HA.6.43 |