Information on SUBCLASS 6.7.1 |
Subclass Accession number: 771
Subclass: 6.7.1 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0005529 (>75 %) GO:0030246 (>75 %) SCOP : 49898 (>75 %) 49899 (>75 %) 49900 (>75 %) |
Number of loops: 12 Average sequence ID (%) : 16.8 +/- 15.7 Average RMSD (Å) : 0.725 +/- 0.344 Consensus geometry
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Consensus Sequence: | XhXpXXGXhX |
(φψ)-conformation: | bbpbaaepbb |
Pattern: | x | [acfgklv] | x | [egst] | [ehnprs] | x | [G] | x | [acfiltv] | x |
Conservation: | -0.322 | -0.377 | -0.343 | 0.141 | -0.279 | -0.487 | 2.775 | -0.611 | -0.019 | -0.477 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1fle_I_43 | 1fle | I | 44 | 53 | CCEGSCGMAC | EEE-SSSEEE | xbxxaaexbx |
1i2m_A_45 | 1i2m | A | 51 | 60 | VFHTNRGPIK | EE-BTT--EE | bbxbaaexbb |
1iye_A_39 | 1iye | A | 41 | 50 | CYDSHKGPVV | EE--TTSSEE | bbxbaaepbx |
1k0i_A_200 | 1k0i | A | 201 | 210 | YANHPRGFAL | EE--TT--EE | xbbbaaexbb |
1m3k_A_202 | 1m3k | A | 203 | 212 | IVKGRKGDIT | EE--TT--EE | xxxbaaexbx |
1m93_B_170 | 1m93 | B | 175 | 184 | SVKESFGNFS | EE--TT--EE | bbbbaaexbb |
1p4o_A_969 | 1p4o | A | 975 | 984 | LGQGSFGMVY | EEE-SSSEEE | aexxaaepbb |
1qmy_A_148 | 1qmy | A | 152 | 161 | ACVTSNGWYA | EE--TTSSEE | bbxbaaepbb |
1qnr_A_73 | 1qnr | A | 73 | 82 | QKLSATGSTI | EE--TT--EE | bbbbaaexbb |
1qnt_A_8 | 1qnt | A | 11 | 20 | TLDSPLGKLE | EE--TTS-EE | bbxbaaexbb |
1r5y_A_292 | 1r5y | A | 292 | 301 | QAFTWDGPIN | EE--TT--EE | xbxbaaexbb |
1sfe_*_24 | 1sfe | - | 28 | 37 | VAESERGICA | EEE-SSSEEE | bbbxaaepab |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1iye_A_39 | 1iye | A | PGU4-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-BUTYRIC ACID | I - 39 |
1k0i_A_200 | 1k0i | A | PHBP-HYDROXYBENZOIC ACID | Y - 201 |
1k0i_A_200 | 1k0i | A | PHBP-HYDROXYBENZOIC ACID | L - 210 |
1k0i_A_200 | 1k0i | A | PHBP-HYDROXYBENZOIC ACID | S - 212 |
1k0i_A_200 | 1k0i | A | PHBP-HYDROXYBENZOIC ACID | Q - 213 |
1k0i_A_200 | 1k0i | A | PHBP-HYDROXYBENZOIC ACID | R - 214 |
Clusters included in this Subclass |
CLUSTER: HA.5.167 |
CLUSTER: HA.5.88 |
CLUSTER: HA.5.90 |
CLUSTER: HA.7.14 |