Information on SUBCLASS 6.9.1 |
Subclass Accession number: 773
Subclass: 6.9.1 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1 (>75 %) |
Number of loops: 9 Average sequence ID (%) : 15.2 +/- 15.9 Average RMSD (Å) : 1.189 +/- 0.496 Consensus geometry
|
Consensus Sequence: | XXGXXpchXh |
(φψ)-conformation: | bbepaabpbb |
Pattern: | x | x | x | [gw] | [dkprs] | [adpst] | [DHST] | [ADGKNS] | [agpq] | x | x |
Conservation: | -0.805 | -0.818 | -0.841 | 2.349 | -0.339 | -0.337 | 0.992 | 0.218 | 0.733 | -0.586 | -0.565 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a9x_B_1837 | 1a9x | B | 1838 | 1848 | QGIHRTDKPAF | EEEEESSSSEE | abbbxaabxbb |
1di2_A_130 | 1di2 | A | 135 | 145 | QESGPPHKREF | EEES-GGG-EE | bbbexaabxbb |
1ds1_A_221 | 1ds1 | A | 221 | 230 | .LYGDADDPFL | .EES-TTS-EE | .bbepaabxxb |
1f8e_A_236 | 1f8e | A | 241 | 251 | FTDGSATGPAE | EEEE-SSS-EE | bbbepaabpbb |
1gzq_A_35 | 1gzq | A | 37 | 47 | IHGWDSDSGTA | EEEEETTTTEE | abbbxaaxpbx |
1h2c_A_120 | 1h2c | A | 123 | 133 | THFGKATNPLV | EEES-TTS-EE | bxbexaabxbb |
1j1l_A_201 | 1j1l | A | 201 | 211 | VYIGPDDAQQK | EEES-TTS-EE | bbbexaabxbx |
1nsc_A_187 | 1nsc | A | 191 | 201 | GVDGPDSNALI | EEES-GGG-EE | bbbexaabxbx |
1spp_B_56 | 1spp | B | 60 | 70 | VFDGLLSGPSY | EESSSTTS-EE | bbxexaaxpxa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gzq_A_35 | 1gzq | A | AC6TWT BINDING SITE FOR CHAIN A | W - 40 |
Clusters included in this Subclass |
CLUSTER: HA.5.57 |
CLUSTER: HA.6.58 |
CLUSTER: HA.7.28 |