Information on SUBCLASS 7.12.1 |
Subclass Accession number: 6494
Subclass: 7.12.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 11.2 +/- 12.3 Average RMSD (Å) : 1.340 +/- 0.270 Consensus geometry
|
Consensus Sequence: | hXXpppXpXhX |
(φψ)-conformation: | bbabapaaapb |
Pattern: | x | [glvy] | [cfw] | [AFV] | [gs] | x | [GRST] | [DEKS] | [EKS] | x | [EKMQ] | [dgs] | [ALM] | x | [flpt] | x |
Conservation: | -0.355 | -1.626 | -0.059 | 0.920 | 0.045 | -0.773 | 0.228 | 1.172 | 1.533 | -0.624 | 1.153 | -0.188 | 1.045 | -1.014 | -1.459 | -1.000 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1iwe_A_441 | 1iwe | A | 441 | 455 | VKWVGVGKSRESMIQ. | EEEEE-SSSTTTEEE. | xabbxabaxaaaxbx. |
1lbv_A_98 | 1lbv | A | 100 | 115 | SLCFSYSDKLKDAFFG | EEEEESSSBGGGEEEE | bbbxbabaxaaapabb |
1o7f_A_88 | 1o7f | A | 89 | 104 | DVKVSETSSHQDAVTI | EEEE-SSS-GGG-EEE | bbbbbababaaaxbxa |
1qtm_A_306 | 1qtm | A | 307 | 322 | VGFVLSRKEPMWADLL | EEEEESSS-TTT--EE | xbbbbabaxaaaxbxa |
1rj9_B_267 | 1rj9 | B | 267 | 281 | IYFAGVSEKPEGLEP. | EEEEE-SSSTT-EEE. | xabbxabaxaaabbx. |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1rj9_B_267 | 1rj9 | B | GCPPHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER | A - 270 |
1rj9_B_267 | 1rj9 | B | GCPPHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER | G - 271 |
1rj9_B_267 | 1rj9 | B | GCPPHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER | V - 272 |
1rj9_B_267 | 1rj9 | B | GCPPHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER | S - 273 |
1rj9_B_267 | 1rj9 | B | GCPPHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER | E - 274 |
1rj9_B_267 | 1rj9 | B | GCPPHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER | G - 278 |
Clusters included in this Subclass |
CLUSTER: HA.8.30 |