Information on SUBCLASS 7.4.1 |
Subclass Accession number: 6485
Subclass: 7.4.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 15 Average sequence ID (%) : 17.9 +/- 19.4 Average RMSD (Å) : 0.767 +/- 0.379 Consensus geometry
|
Consensus Sequence: | hXhXGpppXXX |
(φψ)-conformation: | bbppgbabpbb |
Pattern: | x | [fgikltv] | x | [aglmpv] | x | [dg] | [dgqs] | [deknst] | [deknqt] | x | x | x |
Conservation: | -0.262 | -0.495 | -0.505 | -0.622 | -0.320 | 2.693 | 0.790 | 0.324 | 0.552 | -0.791 | -0.463 | -0.902 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dja_*_244 | 1dja | - | 249 | 260 | FVYPKGQSEPIV | EEE-TT--S-EE | bbbxxgbaxxbx |
1f9z_A_95 | 1f9z | A | 100 | 111 | AGPVKGGTTVIA | EEE-TTS--EEE | pepxpvbaxxbb |
1fiq_B_435 | 1fiq | B | 440 | 451 | VLFQPGSMQVKE | EEE-TTSSBEEE | bbxxpvbabxab |
1h0h_A_74 | 1h0h | A | 74 | 85 | LYRAPGSDQWEE | EEE-TT-SS-EE | bbbxpvxabxbx |
1h1d_A_189 | 1h1d | A | 195 | 206 | SSYLEYMKVVDG | EEE-TTSSSEEE | xbbppvbaxxbb |
1hyo_A_298 | 1hyo | A | 302 | 313 | SLKGEGMSQAAT | EEE-TT-SS-EE | bbbxpgxabxxx |
1kqf_A_112 | 1kqf | A | 112 | 123 | EYRAPGSDKWQR | EEE-TT-SS-EE | bbbxpvxabxbx |
1lar_A_1462 | 1lar | A | 1468 | 1479 | ALHKSGSSEKRE | EEEETTS--EEE | bbbbpgbapbbb |
1lml_*_521 | 1lml | - | 523 | 534 | SVQVHGSNDYTN | EEE-TT-SS-EE | bbbxxvbabxbp |
1m7v_A_168 | 1m7v | A | 169 | 180 | IFRMRGDEQPVW | EEEETT-SS-EE | bbbxxgxabxbb |
1oxx_K_310 | 1oxx | K | 314 | 325 | TITPLDSEEEIF | EEEETT----EE | bbbwxvbaxbbb |
1rwi_A_130 | 1rwi | A | 132 | 143 | VKLAAGSKTQTV | EEE-TT-SS-EE | bbbxpvxabxbx |
1rwi_A_214 | 1rwi | A | 216 | 227 | VKLLAGSTTSTV | EEE-TT-S--EE | bbbxpvxabxbx |
1rwi_A_88 | 1rwi | A | 90 | 101 | VTLAAGSNNQTV | EEE-TT-S--EE | bbbxxvxabxbb |
1who_*_28 | 1who | - | 32 | 43 | ELREHGSDEWVA | EEE-TT----EE | bbbxpvbabxbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h1d_A_189 | 1h1d | A | BIABIA BINDING SITE FOR CHAIN A | L - 198 |
1lml_*_521 | 1lml | * | CA3CARBOHYDRATE BINDING SITE. | N - 534 |
Clusters included in this Subclass |
CLUSTER: HA.5.203 |
CLUSTER: HA.6.104 |
CLUSTER: HA.6.47 |
CLUSTER: HA.7.18 |