Information on SUBCLASS 7.5.1 |
Subclass Accession number: 7996
Subclass: 7.5.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 10.3 +/- 13.1 Average RMSD (Å) : 1.175 +/- 0.450 Consensus geometry
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Consensus Sequence: | hpppXpXXhhh |
(φψ)-conformation: | bbabaabppbb |
Pattern: | [IKLM] | [LY] | [IVY] | [KQRT] | x | [ENS] | x | [EKNQ] | x | [EGP] | x | x | x |
Conservation: | -0.144 | 2.393 | 0.873 | 0.223 | -0.695 | 0.791 | -0.940 | 0.652 | -1.246 | -0.119 | -0.817 | -0.084 | -0.886 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1h2w_A_99 | 1h2w | A | 100 | 112 | LYVQDSLEGEARV | EEEESSTTS--EE | xbbbabaaxxxbx |
1h6l_A_70 | 1h6l | A | 70 | 82 | KLITTNKKSGLAV | EEEEEETTS--EE | bbbbbbaabxxbb |
1nd6_A_292 | 1nd6 | A | 297 | 309 | MYYRNETQHEPYP | EEEE--TTS--EE | bbbxabaabxpxx |
1pfq_A_171 | 1pfq | A | 172 | 184 | IYVKIEPNLPSYR | EEEESSTTS--EE | xbbbabaabxxbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1h6l_A_70 | 1h6l | A | CACALCIUM ION | K - 76 |
1h6l_A_70 | 1h6l | A | PO4PHOSPHATE ION | K - 76 |
1nd6_A_292 | 1nd6 | A | NAGN-ACETYL-D-GLUCOSAMINE | Y - 299 |
1nd6_A_292 | 1nd6 | A | NAGN-ACETYL-D-GLUCOSAMINE | R - 300 |
1nd6_A_292 | 1nd6 | A | NAGN-ACETYL-D-GLUCOSAMINE | N - 301 |
1nd6_A_292 | 1nd6 | A | NAGN-ACETYL-D-GLUCOSAMINE | E - 302 |
1nd6_A_292 | 1nd6 | A | NAGN-ACETYL-D-GLUCOSAMINE | Y - 308 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h6l_A_70 | 1h6l | A | AC9PRODUCT PO4 502 BINDING SITE FOR CHAIN A | K - 76 |
Clusters included in this Subclass |
CLUSTER: HA.6.41 |