Information on SUBCLASS 9.10.1 |
Subclass Accession number: 6555
Subclass: 9.10.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 74.8 +/- 10.3 Average RMSD (Å) : 0.360 +/- 0.134 Consensus geometry
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Consensus Sequence: | ApWphDYWGpGTX |
(φψ)-conformation: | bpaalabbpaebp |
Pattern: | [A] | [TV] | [Y] | [Y] | [C] | [AT] | [NR] | [RW] | [DEH] | [gm] | [DT] | [Y] | [W] | [G] | [AEQ] | [G] | [T] | [lt] | [V] | [T] | [V] |
Conservation: | -0.177 | -0.831 | 0.944 | 0.944 | 1.691 | -0.837 | -0.650 | -0.465 | -0.777 | -1.358 | -0.735 | 0.944 | 2.438 | 0.570 | -1.046 | 0.570 | 0.197 | -1.264 | -0.177 | 0.197 | -0.177 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1gpo_H_91 | 1gpo | H | 91 | 111 | AVYYCANWHGDYWGQGTTVTV | EEEEEEETTSSSB---EEEEE | ebxbbbxaavabbxaebxbbb |
1n7m_L_92 | 1n7m | L | 92 | 112 | AVYYCTRRDSDYWGAGTTVTV | EEEEEEETTSSSB---EEEEE | ebbbbbxaavabbxaebxbbb |
1ndg_B_391 | 1ndg | B | 391 | 411 | ATYYCANWDGTYWGEGTLVTV | EEEEEEETTSS-B---EEEEE | bxxbbbxaavabbxaebxbbb |
1ndm_B_391 | 1ndm | B | 391 | 411 | ATYYCARWEMDYWGQGTSVTV | EEEEEEETTSS-B---EEEEE | bxbbbbxaavabbxaMbxbbb |
1uac_H_91 | 1uac | H | 91 | 111 | ATYYCANWDGDYWGQGTLVTV | EEEEEEETTSS-B---EEEEE | bxxbxbxaavabbxaebxbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1n7m_L_92 | 1n7m | L | MMPN-METHYLMESOPORPHYRIN | R - 98 |
1n7m_L_92 | 1n7m | L | MMPN-METHYLMESOPORPHYRIN | R - 99 |
1n7m_L_92 | 1n7m | L | MMPN-METHYLMESOPORPHYRIN | D - 100 |
1n7m_L_92 | 1n7m | L | MMPN-METHYLMESOPORPHYRIN | S - 101 |
1n7m_L_92 | 1n7m | L | MMPN-METHYLMESOPORPHYRIN | D - 102 |
Clusters included in this Subclass |
CLUSTER: HA.8.41 |