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Information on SUBCLASS 0.1.10
Subclass Accession number: 5197
Subclass: 0.1.10 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 18

Average sequence ID (%) : 10.7 +/- 14.7
Average RMSD (Å) : 0.522 +/- 0.159

Consensus geometry
d (Å): 5 delta (°): 0-45 theta (°): 45-90 rho (°): 135-180
Consensus Sequence: XXXX
(φψ)-conformation: aabb
Pattern: [dehknpqrs]xx[denqrsy][adgkqrs]xxx
Conservation:0.063-0.6730.2321.6030.140-1.6780.876-0.564
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cex_*_1351cex   -135142SAIRDKIAHHHHTTEEaaaaaaxa
1elj_A_961elj   A97104MAQDAMQYHHHHHTEEaaaaaabb
1eo9_B_4981eo9   B499506QQRRALIAHHHHTTEEaaaaaabx
1f0x_A_4751f0x   A475482PEIDSQLVHHHHTTEEaaaaaaba
1fp3_A_2041fp3   A212219RRILQHVQHHHHTTEEaaaaaaxb
1m1n_A_221m1n   A2633KDRNKHLAHHHHTTEEaaaaaabb
1n4q_B_691n4q   B7481EWIYSLQVHHHHTTEEaaaaaaxx
1nw1_A_3101nw1   A317324HFIEWTIDHHHHTTEEaaaaaabb
1oh4_A_161oh4   A1623PEEVKNWWHHHHTTEEaaaaaabb
1qq9_A_1471qq9   A147154SADRSKLAHHHHTTEEaaaaaaxa
1rif_A_191rif   A2431ELRDFFSFHHHHHTEEaaaaaabb
1tca_*_131tca   -1421SVLDAGLTHHHHHTEEaaaaaabb
1urs_A_1211urs   A122129NTIDAIKVHHHHTTEEaaaaaaxb
1ycq_A_921ycq   A97104AMISRNLVHHHHTTEEaaaaaaba
1ygs_*_4931ygs   -494501DLRRLCILHHHHTTEEaaaaaabb
3mbp_*_913mbp   -9299FTWDAVRYHHHHTTEEaaaaaaxb
3pcc_M_4983pcc   M499506EAVQQLIAHHHHTTEEaaaaaaxx
3thi_A_933thi   A94101FALQGAKRHHHHHTEEaaaaaabb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1f0x_A_4751f0x   A     FADFLAVIN-ADENINE DINUCLEOTIDE H - 489
1nw1_A_3101nw1   A     CACALCIUM ION I - 319
1nw1_A_3101nw1   A     CACALCIUM ION E - 320
1nw1_A_3101nw1   A     CACALCIUM ION W - 321
1nw1_A_3101nw1   A     CACALCIUM ION T - 322
1nw1_A_3101nw1   A     CACALCIUM ION I - 323
1nw1_A_3101nw1   A     CACALCIUM ION D - 324
1oh4_A_161oh4   A     GOLGLYCEROL P - 16
1oh4_A_161oh4   A     GOLGLYCEROL E - 18
1oh4_A_161oh4   A     GOLGLYCEROL V - 19
1oh4_A_161oh4   A     GOLGLYCEROL K - 20
1oh4_A_161oh4   A     GOLGLYCEROL N - 21
1oh4_A_161oh4   A     GOLGLYCEROL W - 22
1oh4_A_161oh4   A     GOLGLYCEROL W - 23
1oh4_A_161oh4   A     GOLGLYCEROL N - 24
1oh4_A_161oh4   A     BMABETA-D-MANNOSE S - 25
1oh4_A_161oh4   A     BMABETA-D-MANNOSE G - 26
1oh4_A_161oh4   A     BMABETA-D-MANNOSE T - 27
1oh4_A_161oh4   A     BMABETA-D-MANNOSE W - 28
1oh4_A_161oh4   A     GLAALPHA D-GALACTOSE W - 28
1qq9_A_1471qq9   A     METMETHIONINE N - 158
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1oh4_A_161oh4   A AC9GOL BINDING SITE FOR CHAIN AE - 18
1oh4_A_161oh4   A AC8GOL BINDING SITE FOR CHAIN AW - 22
1oh4_A_161oh4   A AC6GLA BINDING SITE FOR CHAIN AW - 28

Clusters included in this Subclass
CLUSTER: HE.1.20
CLUSTER: HE.2.22