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Information on SUBCLASS 0.1.24
Subclass Accession number: 24
Subclass: 0.1.24 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0008168 (>75 %)  GO:0008757 (>75 %)  GO:0016741 (>75 %)  
SCOP : 53334 (>75 %)  53335 (>75 %)  
Number of loops: 4

Average sequence ID (%) : 18.1 +/- 16.1
Average RMSD (Å) : 0.600 +/- 0.163

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 90-135 rho (°): 45-90
Consensus Sequence: pchX
(φψ)-conformation: aabp
Pattern: [AEGP][AQS][LMV]x[AKMT][AE][L][AKT][DGN][ALTV]xx
Conservation:-0.8840.0900.820-1.108-0.8280.5392.253-0.2260.607-0.492-0.772-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1oke_A_2571oke   A258269GAMHTALTGATEHHHHHHTTTSEEaaaaaaaaaxxx
1p3w_A_3101p3w   A311321ESLIMALKDLA.HHHHHHTTTEE.aaaaaaaaabx.
1uc7_A_541uc7   A5465PQVQKALADTVLHHHHHHTTTSEEaaaaaaaaabxb
1uqt_A_2421uqt   A245256AQLKAELKNVQNHHHHHHTTT-EEaaaaaaaaabxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1oke_A_2571oke   A     BOGB-OCTYLGLUCOSIDE T - 268
1oke_A_2571oke   A     BOGB-OCTYLGLUCOSIDE I - 270
1oke_A_2571oke   A     BOGB-OCTYLGLUCOSIDE Q - 271
1uqt_A_2421uqt   A     U2FURIDINE-5'-DIPHOSPHATE-2-DEOXY-2-FLUORO-ALPHA-D-GALACTOSE V - 260
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1oke_A_2571oke   A BO1BOG BINDING SITE FOR CHAIN AI - 270
1oke_A_2571oke   A BO1BOG BINDING SITE FOR CHAIN AQ - 271

Clusters included in this Subclass
CLUSTER: HE.3.161
CLUSTER: HE.5.135