Information on SUBCLASS 0.1.24 |
Subclass Accession number: 24
Subclass: 0.1.24 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0008168 (>75 %) GO:0008757 (>75 %) GO:0016741 (>75 %) SCOP : 53334 (>75 %) 53335 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 18.1 +/- 16.1 Average RMSD (Å) : 0.600 +/- 0.163 Consensus geometry
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Consensus Sequence: | pchX |
(φψ)-conformation: | aabp |
Pattern: | [AEGP] | [AQS] | [LMV] | x | [AKMT] | [AE] | [L] | [AKT] | [DGN] | [ALTV] | x | x |
Conservation: | -0.884 | 0.090 | 0.820 | -1.108 | -0.828 | 0.539 | 2.253 | -0.226 | 0.607 | -0.492 | -0.772 | -1.000 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1oke_A_257 | 1oke | A | 258 | 269 | GAMHTALTGATE | HHHHHHTTTSEE | aaaaaaaaaxxx |
1p3w_A_310 | 1p3w | A | 311 | 321 | ESLIMALKDLA. | HHHHHHTTTEE. | aaaaaaaaabx. |
1uc7_A_54 | 1uc7 | A | 54 | 65 | PQVQKALADTVL | HHHHHHTTTSEE | aaaaaaaaabxb |
1uqt_A_242 | 1uqt | A | 245 | 256 | AQLKAELKNVQN | HHHHHHTTT-EE | aaaaaaaaabxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1oke_A_257 | 1oke | A | BOGB-OCTYLGLUCOSIDE | T - 268 |
1oke_A_257 | 1oke | A | BOGB-OCTYLGLUCOSIDE | I - 270 |
1oke_A_257 | 1oke | A | BOGB-OCTYLGLUCOSIDE | Q - 271 |
1uqt_A_242 | 1uqt | A | U2FURIDINE-5'-DIPHOSPHATE-2-DEOXY-2-FLUORO-ALPHA-D-GALACTOSE | V - 260 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1oke_A_257 | 1oke | A | BO1BOG BINDING SITE FOR CHAIN A | I - 270 |
1oke_A_257 | 1oke | A | BO1BOG BINDING SITE FOR CHAIN A | Q - 271 |
Clusters included in this Subclass |
CLUSTER: HE.3.161 |
CLUSTER: HE.5.135 |