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Information on SUBCLASS 0.1.27
Subclass Accession number: 27
Subclass: 0.1.27 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.3 (>75 %)  1.3.1 (>75 %)  1.3.1.9
GO : GO:0008415 (>75 %)  GO:0016627 (>75 %)  GO:0016628 (>75 %)  GO:0016631 (>75 %)  GO:0016746 (>75 %)  GO:0016747 (>75 %)  
SCOP : 48556 (>75 %)  48557 (>75 %)  48558 (>75 %)  51734 (>75 %)  51735 (>75 %)  51751 (>75 %)  55855 (>75 %)  55856 (>75 %)  55857 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 11.5 +/- 17.2
Average RMSD (Å) : 0.625 +/- 0.050

Consensus geometry
d (Å): 5 delta (°): 0-45 theta (°): 45-90 rho (°): 135-180
Consensus Sequence: pphX
(φψ)-conformation: aab_
Pattern: xx[ADV][ALMV]x[EL][FKL]x[QRT][RSY]xx[GLY]
Conservation:-1.168-1.306-0.0101.448-1.1680.3820.155-0.0271.7840.711-0.5140.663-0.953
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cxy_A_721cxy   A7284SLAARLLQRYLIGHHHHHHHHHTEEEaaaaaaaaaapae
1p1j_A_4381p1j   A449461LLVMTEFCTRVSYHHHHHHHHHTEEEaaaaaaaaaabbb
1sox_A_681sox   A6880PHVLELLQQYKVGHHHHHHHHTTEEEaaaaaaaaaaxae
2pva_A_1162pva   A116128VDDVIEKLTSYTLHHHHHHHHTTEEEaaaaaaaaaabbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cxy_A_721cxy   A     HEMPROTOPORPHYRIN IX CONTAINING FE S - 72
1cxy_A_721cxy   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 73
1cxy_A_721cxy   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 74
1cxy_A_721cxy   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 77
1cxy_A_721cxy   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 78
1cxy_A_721cxy   A     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 81
1p1j_A_4381p1j   A     PO4PHOSPHATE ION D - 438
1p1j_A_4381p1j   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE D - 438
1p1j_A_4381p1j   A     CRYPROPANE-1,2,3-TRIOL D - 438
1p1j_A_4381p1j   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE S - 439
1p1j_A_4381p1j   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE L - 441
1p1j_A_4381p1j   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE A - 442
1sox_A_681sox   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 69
1sox_A_681sox   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 70
1sox_A_681sox   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 74
1sox_A_681sox   A     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 77

Clusters included in this Subclass
CLUSTER: HE.1.37