Logo
Information on SUBCLASS 0.1.28
Subclass Accession number: 28
Subclass: 0.1.28 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1 (>75 %)  4.1 (>75 %)  4.1.1 (>75 %)  4.1.1.17
GO : GO:0008168 (>75 %)  GO:0008757 (>75 %)  GO:0016741 (>75 %)  GO:0016830 (>75 %)  GO:0016831 (>75 %)  
SCOP : 51419 (>75 %)  51420 (>75 %)  53334 (>75 %)  53335 (>75 %)  
Number of loops: 4

Average sequence ID (%) : 16.7 +/- 14.4
Average RMSD (Å) : 0.650 +/- 0.100

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: XXLc
(φψ)-conformation: aabp
Pattern: xx[AFIL][ILY][DER]x[ACGV][EKR]x[HLVY][L][AKN][DPR][GN][G]x[FGIM][GMVW][IMV]x[ITV]x
Conservation:-0.612-0.933-0.3720.2100.432-0.772-0.5720.731-0.652-0.4121.631-0.091-0.0701.4112.913-0.852-0.812-0.7720.776-0.6120.444-1.013
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dus_A_1361dus   A140161HRIIEEGKELLKDNGEIWVVIQHHHHHHHHHHEEEEEEEEEEEEaaaaaaaaaaxxpvxbbbbbbx
1ej0_A_1331ej0   A145166ELALEMCRDVLAPGGSFVVKVFHHHHHHHHHHEEEEEEEEEEEEaaaaaaaaaaxxpvxbbbbxbb
1g8a_A_1561g8a   A158179KILIDNAEVYLKRGGYGMIAVKHHHHHHHHHHEEEEEEEEEEEEaaaaaaaaaaxxxvxbbbbxbx
1uir_A_1751uir   A175196VEFYRLVKAHLNPGGVMGMQTGHHHHHHHHHTEEEEEEEEEEEEaaaaaaaaaabxxvxbbbbxae
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dus_A_1361dus   A     MSESELENOMETHIONINE I - 143
1dus_A_1361dus   A     MSESELENOMETHIONINE I - 156
1dus_A_1361dus   A     MSESELENOMETHIONINE W - 157
1dus_A_1361dus   A     MSESELENOMETHIONINE V - 158
1ej0_A_1331ej0   A     SAMS-ADENOSYLMETHIONINE L - 143
1ej0_A_1331ej0   A     HGMERCURY (II) ION L - 148
1ej0_A_1331ej0   A     HGMERCURY (II) ION C - 151
1ej0_A_1331ej0   A     HGMERCURY (II) ION R - 152
1ej0_A_1331ej0   A     HGMERCURY (II) ION D - 153
1ej0_A_1331ej0   A     HGMERCURY (II) ION L - 155
1ej0_A_1331ej0   A     HGMERCURY (II) ION F - 161
1ej0_A_1331ej0   A     SAMS-ADENOSYLMETHIONINE K - 164

Clusters included in this Subclass
CLUSTER: HE.0.14