Information on SUBCLASS 0.1.28 |
Subclass Accession number: 28
Subclass: 0.1.28 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1 (>75 %) 4.1 (>75 %) 4.1.1 (>75 %) 4.1.1.17 GO : GO:0008168 (>75 %) GO:0008757 (>75 %) GO:0016741 (>75 %) GO:0016830 (>75 %) GO:0016831 (>75 %) SCOP : 51419 (>75 %) 51420 (>75 %) 53334 (>75 %) 53335 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 16.7 +/- 14.4 Average RMSD (Å) : 0.650 +/- 0.100 Consensus geometry
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Consensus Sequence: | XXLc |
(φψ)-conformation: | aabp |
Pattern: | x | x | [AFIL] | [ILY] | [DER] | x | [ACGV] | [EKR] | x | [HLVY] | [L] | [AKN] | [DPR] | [GN] | [G] | x | [FGIM] | [GMVW] | [IMV] | x | [ITV] | x |
Conservation: | -0.612 | -0.933 | -0.372 | 0.210 | 0.432 | -0.772 | -0.572 | 0.731 | -0.652 | -0.412 | 1.631 | -0.091 | -0.070 | 1.411 | 2.913 | -0.852 | -0.812 | -0.772 | 0.776 | -0.612 | 0.444 | -1.013 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dus_A_136 | 1dus | A | 140 | 161 | HRIIEEGKELLKDNGEIWVVIQ | HHHHHHHHHHEEEEEEEEEEEE | aaaaaaaaaaxxpvxbbbbbbx |
1ej0_A_133 | 1ej0 | A | 145 | 166 | ELALEMCRDVLAPGGSFVVKVF | HHHHHHHHHHEEEEEEEEEEEE | aaaaaaaaaaxxpvxbbbbxbb |
1g8a_A_156 | 1g8a | A | 158 | 179 | KILIDNAEVYLKRGGYGMIAVK | HHHHHHHHHHEEEEEEEEEEEE | aaaaaaaaaaxxxvxbbbbxbx |
1uir_A_175 | 1uir | A | 175 | 196 | VEFYRLVKAHLNPGGVMGMQTG | HHHHHHHHHTEEEEEEEEEEEE | aaaaaaaaaabxxvxbbbbxae |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dus_A_136 | 1dus | A | MSESELENOMETHIONINE | I - 143 |
1dus_A_136 | 1dus | A | MSESELENOMETHIONINE | I - 156 |
1dus_A_136 | 1dus | A | MSESELENOMETHIONINE | W - 157 |
1dus_A_136 | 1dus | A | MSESELENOMETHIONINE | V - 158 |
1ej0_A_133 | 1ej0 | A | SAMS-ADENOSYLMETHIONINE | L - 143 |
1ej0_A_133 | 1ej0 | A | HGMERCURY (II) ION | L - 148 |
1ej0_A_133 | 1ej0 | A | HGMERCURY (II) ION | C - 151 |
1ej0_A_133 | 1ej0 | A | HGMERCURY (II) ION | R - 152 |
1ej0_A_133 | 1ej0 | A | HGMERCURY (II) ION | D - 153 |
1ej0_A_133 | 1ej0 | A | HGMERCURY (II) ION | L - 155 |
1ej0_A_133 | 1ej0 | A | HGMERCURY (II) ION | F - 161 |
1ej0_A_133 | 1ej0 | A | SAMS-ADENOSYLMETHIONINE | K - 164 |
Clusters included in this Subclass |
CLUSTER: HE.0.14 |