Information on SUBCLASS 0.1.30 |
Subclass Accession number: 5217
Subclass: 0.1.30 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 17.2 +/- 16.9 Average RMSD (Å) : 0.583 +/- 0.133 Consensus geometry
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Consensus Sequence: | ppXp |
(φψ)-conformation: | aabb |
Pattern: | [ILMV] | x | [derw] | [al] | x | [AEK] | [DNPRS] | [FHKY] | [dqrst] | [IV] | x | [AFIKL] |
Conservation: | 1.198 | -1.044 | -0.907 | -0.160 | -0.448 | 0.690 | -0.237 | 0.784 | -0.821 | 2.193 | -0.539 | -0.709 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1c4x_A_51 | 1c4x | A | 51 | 62 | IPDLAENFFVVA | HHHHHTTSEEEE | aaaaaaabxxbb |
1gdh_A_13 | 1gdh | A | 16 | 27 | MARARESYDVIA | HHHHHTTSEEEE | aaaaaaabxxbx |
1jl2_A_102 | 1jl2 | A | 108 | 119 | LLLAMAPHRVRF | HHHHHTTSEEEE | aaaaaaabbbbx |
1rku_A_73 | 1rku | A | 77 | 88 | VDWLRERFQVVI | HHHHHTTSEEEE | aaaaaaabxbbx |
1vhv_A_65 | 1vhv | A | 68 | 79 | LIERAKSKSVVL | HHHHHTTSEEEE | aaaaaaabxbbb |
1vhx_A_42 | 1vhx | A | 45 | 56 | LSELIKDYTIDK | HHHHHTTSEEEE | aaaaaaabbxab |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1rku_A_73 | 1rku | A | EDO1,2-ETHANEDIOL | V - 77 |
1rku_A_73 | 1rku | A | EDO1,2-ETHANEDIOL | D - 78 |
1rku_A_73 | 1rku | A | EDO1,2-ETHANEDIOL | W - 79 |
1rku_A_73 | 1rku | A | EDO1,2-ETHANEDIOL | R - 81 |
1rku_A_73 | 1rku | A | EDO1,2-ETHANEDIOL | E - 82 |
1rku_A_73 | 1rku | A | EDO1,2-ETHANEDIOL | R - 83 |
1rku_A_73 | 1rku | A | EDO1,2-ETHANEDIOL | F - 84 |
1rku_A_73 | 1rku | A | EDO1,2-ETHANEDIOL | Q - 85 |
1rku_A_73 | 1rku | A | EDO1,2-ETHANEDIOL | D - 91 |
1vhv_A_65 | 1vhv | A | MSESELENOMETHIONINE | L - 80 |
1vhv_A_65 | 1vhv | A | MSESELENOMETHIONINE | V - 81 |
Clusters included in this Subclass |
CLUSTER: HE.3.103 |