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Information on SUBCLASS 0.1.30
Subclass Accession number: 5217
Subclass: 0.1.30 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 17.2 +/- 16.9
Average RMSD (Å) : 0.583 +/- 0.133

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: ppXp
(φψ)-conformation: aabb
Pattern: [ILMV]x[derw][al]x[AEK][DNPRS][FHKY][dqrst][IV]x[AFIKL]
Conservation:1.198-1.044-0.907-0.160-0.4480.690-0.2370.784-0.8212.193-0.539-0.709
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1c4x_A_511c4x   A5162IPDLAENFFVVAHHHHHTTSEEEEaaaaaaabxxbb
1gdh_A_131gdh   A1627MARARESYDVIAHHHHHTTSEEEEaaaaaaabxxbx
1jl2_A_1021jl2   A108119LLLAMAPHRVRFHHHHHTTSEEEEaaaaaaabbbbx
1rku_A_731rku   A7788VDWLRERFQVVIHHHHHTTSEEEEaaaaaaabxbbx
1vhv_A_651vhv   A6879LIERAKSKSVVLHHHHHTTSEEEEaaaaaaabxbbb
1vhx_A_421vhx   A4556LSELIKDYTIDKHHHHHTTSEEEEaaaaaaabbxab
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1rku_A_731rku   A     EDO1,2-ETHANEDIOL V - 77
1rku_A_731rku   A     EDO1,2-ETHANEDIOL D - 78
1rku_A_731rku   A     EDO1,2-ETHANEDIOL W - 79
1rku_A_731rku   A     EDO1,2-ETHANEDIOL R - 81
1rku_A_731rku   A     EDO1,2-ETHANEDIOL E - 82
1rku_A_731rku   A     EDO1,2-ETHANEDIOL R - 83
1rku_A_731rku   A     EDO1,2-ETHANEDIOL F - 84
1rku_A_731rku   A     EDO1,2-ETHANEDIOL Q - 85
1rku_A_731rku   A     EDO1,2-ETHANEDIOL D - 91
1vhv_A_651vhv   A     MSESELENOMETHIONINE L - 80
1vhv_A_651vhv   A     MSESELENOMETHIONINE V - 81

Clusters included in this Subclass
CLUSTER: HE.3.103