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Information on SUBCLASS 0.1.33
Subclass Accession number: 5220
Subclass: 0.1.33 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 34.4 +/- 30.0
Average RMSD (Å) : 0.440 +/- 0.089

Consensus geometry
d (Å): 11 delta (°): 0-45 theta (°): 45-90 rho (°): 90-135
Consensus Sequence: XXhp
(φψ)-conformation: aabb
Pattern: [AKS][GST][ACST][il][E][DV][IV][FLM][ilv][R]x[CNV][EPQR][as][FL][DKNT]
Conservation:-0.237-0.347-0.416-0.7372.129-0.5661.0880.143-0.7982.129-0.632-0.823-0.511-0.6780.854-0.597
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1af7_*_2381af7   -238253KTTQEDILRRFVPLLKHHHHHHHHHHHGGGEEaaaaaaaaaaaaaaxx
1ie9_A_2561ie9   A265280SSAIEVIMLRSNESFTHHHHHHHHHHGGGTEEaaaaaaaaaaaaaaxb
1n83_A_3491n83   A358373AGSLEVVFIRMCRAFDHHHHHHHHHHGGGGEEaaaaaaaaaaaaaabx
1nq7_A_2881nq7   A297312SGCLEVVLVRMCRAFNHHHHHHHHHHHGGGEEaaaaaaaaaaaaaabb
1rkg_A_2521rkg   A261276SSAIEVIMLRSNQSFTHHHHHHHHHHGGGTEEaaaaaaaaaaaaaaxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1af7_*_2381af7   *     SAHS-ADENOSYL-L-HOMOCYSTEINE I - 244
1ie9_A_2561ie9   A     VDX5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL I - 268
1ie9_A_2561ie9   A     VDX5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL V - 270
1ie9_A_2561ie9   A     VDX5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL I - 271
1ie9_A_2561ie9   A     VDX5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL M - 272
1ie9_A_2561ie9   A     VDX5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL R - 274
1ie9_A_2561ie9   A     VDX5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL S - 275
1ie9_A_2561ie9   A     VDX5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL N - 276
1ie9_A_2561ie9   A     VDX5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL E - 277
1ie9_A_2561ie9   A     VDX5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL S - 278
1ie9_A_2561ie9   A     VDX5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL F - 279
1n83_A_3491n83   A     CLRCHOLESTEROL V - 364
1n83_A_3491n83   A     CLRCHOLESTEROL F - 365
1n83_A_3491n83   A     CLRCHOLESTEROL R - 367
1n83_A_3491n83   A     CLRCHOLESTEROL M - 368
1n83_A_3491n83   A     CLRCHOLESTEROL C - 369
1n83_A_3491n83   A     CLRCHOLESTEROL R - 370
1n83_A_3491n83   A     CLRCHOLESTEROL A - 371
1nq7_A_2881nq7   A     ARL7-(3,5-DITERT-BUTYLPHENYL)-3-METHYLOCTA-2,4,6-TRIENOIC ACID L - 300
1nq7_A_2881nq7   A     ARL7-(3,5-DITERT-BUTYLPHENYL)-3-METHYLOCTA-2,4,6-TRIENOIC ACID E - 301
1nq7_A_2881nq7   A     ARL7-(3,5-DITERT-BUTYLPHENYL)-3-METHYLOCTA-2,4,6-TRIENOIC ACID V - 303
1nq7_A_2881nq7   A     ARL7-(3,5-DITERT-BUTYLPHENYL)-3-METHYLOCTA-2,4,6-TRIENOIC ACID L - 304
1nq7_A_2881nq7   A     ARL7-(3,5-DITERT-BUTYLPHENYL)-3-METHYLOCTA-2,4,6-TRIENOIC ACID R - 306
1nq7_A_2881nq7   A     ARL7-(3,5-DITERT-BUTYLPHENYL)-3-METHYLOCTA-2,4,6-TRIENOIC ACID M - 307
1nq7_A_2881nq7   A     ARL7-(3,5-DITERT-BUTYLPHENYL)-3-METHYLOCTA-2,4,6-TRIENOIC ACID R - 309
1nq7_A_2881nq7   A     ARL7-(3,5-DITERT-BUTYLPHENYL)-3-METHYLOCTA-2,4,6-TRIENOIC ACID A - 310
1rkg_A_2521rkg   A     VD15-{2-[1-(1-METHYL-PROPYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-2-METHYLENE-CYCLOHEXANE-1,3-DIOL I - 264
1rkg_A_2521rkg   A     VD15-{2-[1-(1-METHYL-PROPYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-2-METHYLENE-CYCLOHEXANE-1,3-DIOL I - 267
1rkg_A_2521rkg   A     VD15-{2-[1-(1-METHYL-PROPYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-2-METHYLENE-CYCLOHEXANE-1,3-DIOL M - 268
1rkg_A_2521rkg   A     VD15-{2-[1-(1-METHYL-PROPYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-2-METHYLENE-CYCLOHEXANE-1,3-DIOL R - 270
1rkg_A_2521rkg   A     VD15-{2-[1-(1-METHYL-PROPYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-2-METHYLENE-CYCLOHEXANE-1,3-DIOL S - 271
1rkg_A_2521rkg   A     VD15-{2-[1-(1-METHYL-PROPYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-2-METHYLENE-CYCLOHEXANE-1,3-DIOL N - 272
1rkg_A_2521rkg   A     VD15-{2-[1-(1-METHYL-PROPYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-2-METHYLENE-CYCLOHEXANE-1,3-DIOL Q - 273
1rkg_A_2521rkg   A     VD15-{2-[1-(1-METHYL-PROPYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-2-METHYLENE-CYCLOHEXANE-1,3-DIOL S - 274
1rkg_A_2521rkg   A     VD15-{2-[1-(1-METHYL-PROPYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-2-METHYLENE-CYCLOHEXANE-1,3-DIOL F - 275

Clusters included in this Subclass
CLUSTER: HE.4.114