Information on SUBCLASS 0.1.7 |
Subclass Accession number: 5194
Subclass: 0.1.7 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 24 Average sequence ID (%) : 7.5 +/- 11.6 Average RMSD (Å) : 0.496 +/- 0.165 Consensus geometry
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Consensus Sequence: | XXhX |
(φψ)-conformation: | aabb |
Pattern: | x | [adegpqs] | x | x | [acfilmvwy] | x | x | x |
Conservation: | -0.130 | 0.176 | 0.803 | -1.255 | 1.355 | -0.948 | -1.000 | -1.000 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a8i_*_329 | 1a8i | - | 329 | 336 | FPDKVAIQ | HHHHEEEE | aaaabbbb |
1cjx_A_136 | 1cjx | A | 137 | 143 | YDIDFVY. | HHHHEEE. | aaaabbx. |
1dfo_A_135 | 1dfo | A | 136 | 143 | SGKLYNIV | HHHHSEEE | aaaabxxb |
1ez0_A_416 | 1ez0 | A | 426 | 433 | LEEIAGRL | HHTTEEEE | aaaababb |
1f8r_A_405 | 1f8r | A | 408 | 415 | IQSFCYPS | HHHHEEEE | aaaabbxa |
1g61_A_2107 | 1g61 | A | 2107 | 2113 | LGNLILT. | HHHHEEE. | aaaabbb. |
1g62_A_104 | 1g62 | A | 104 | 110 | LGNVICC. | HHHHEEE. | aaaabbb. |
1g62_A_13 | 1g62 | A | 13 | 19 | IGVFSKL. | HHHHEEE. | aaaabbb. |
1g62_A_193 | 1g62 | A | 193 | 199 | VGAGMVV. | HHHHEEE. | aaaabbb. |
1gc5_A_404 | 1gc5 | A | 413 | 420 | LEKEFTEF | HHHHSEEE | aaaabxxa |
1h16_A_529 | 1h16 | A | 538 | 545 | AIKYAKVK | HHHHSEEE | aaaabbbb |
1iar_B_29 | 1iar | B | 29 | 36 | CSTELRLL | HHHHEEEE | aaaabbbx |
1kl1_A_131 | 1kl1 | A | 132 | 139 | SGVQYNFV | HHHHSEEE | aaaabxxb |
1l1y_A_235 | 1l1y | A | 235 | 240 | LDLFTK.. | HHHHEE.. | aaaabx.. |
1l5w_A_297 | 1l5w | A | 297 | 304 | LADYEVIQ | HHHHEEEE | aaaabbbx |
1mjn_A_282 | 1mjn | A | 282 | 289 | ASEFVKIL | HHHHEEEE | aaaabbbb |
1n7o_A_883 | 1n7o | A | 883 | 888 | DQEVFK.. | HHHHEE.. | aaaabb.. |
1nth_A_425 | 1nth | A | 425 | 430 | FQECYD.. | HHHHEE.. | aaaabx.. |
1nvt_A_178 | 1nvt | A | 178 | 185 | FGEEVKFS | HHHHEEEE | aaaabbbb |
1o4z_A_95 | 1o4z | A | 97 | 102 | FLEKWD.. | HHHHEE.. | aaaabb.. |
1o54_A_204 | 1o54 | A | 213 | 220 | KLQELPFI | HHHHSSEE | aaaabxbb |
1p2z_A_407 | 1p2z | A | 407 | 413 | PDVRIIE. | HHHHSEE. | aaaabxb. |
1s5a_A_64 | 1s5a | A | 64 | 71 | YPKQIHLS | HHHHEEEE | aaaabbxa |
2eql_*_61 | 2eql | - | 61 | 66 | NKWWCK.. | HHHHEE.. | aaaabx.. |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1s5a_A_64 | 1s5a | A | MSESELENOMETHIONINE | Y - 64 |
1s5a_A_64 | 1s5a | A | ACTACETATE ION | Y - 64 |
1s5a_A_64 | 1s5a | A | GOLGLYCEROL | Y - 64 |
1s5a_A_64 | 1s5a | A | MSESELENOMETHIONINE | P - 65 |
1s5a_A_64 | 1s5a | A | ACTACETATE ION | I - 68 |
1s5a_A_64 | 1s5a | A | MSESELENOMETHIONINE | L - 70 |
1s5a_A_64 | 1s5a | A | ACTACETATE ION | L - 70 |
1s5a_A_64 | 1s5a | A | GOLGLYCEROL | L - 70 |
1s5a_A_64 | 1s5a | A | MSESELENOMETHIONINE | F - 73 |
1s5a_A_64 | 1s5a | A | GOLGLYCEROL | F - 73 |
Clusters included in this Subclass |
CLUSTER: HE.0.7 |
CLUSTER: HE.1.11 |