Information on SUBCLASS 1.1.8 |
Subclass Accession number: 5274
Subclass: 1.1.8 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 18.5 +/- 16.0 Average RMSD (Å) : 0.700 +/- 0.122 Consensus geometry
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Consensus Sequence: | XXGhp |
(φψ)-conformation: | aagbb |
Pattern: | x | [DEGT] | [aelm] | [ALM] | [akrt] | [AR] | x | [G] | x | [ekr] | [AGVY] | [ilv] | [CLV] |
Conservation: | -0.769 | -0.145 | -0.667 | 0.107 | -0.412 | 0.367 | -0.484 | 3.079 | -0.682 | -0.128 | -0.589 | 0.036 | 0.287 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1efv_A_36 | 1efv | A | 41 | 53 | ITAATRLGGEVSC | HHHHHTTTSEEEE | aaaaaaavbxbbb |
1ibj_A_236 | 1ibj | A | 240 | 252 | SEMAHAQGALVLV | HHHHHTTT-EEEE | aaaaaaavbxbbb |
1nh8_A_259 | 1nh8 | A | 263 | 275 | MDELAAIGAKAIL | HHHHHHTT-EEEE | aaaaaaagxblxb |
1o5i_A_41 | 1o5i | A | 41 | 53 | EELLKRSGHRYVV | HHHHHHT-SEEEE | aaaaaaavbxbbx |
1uek_A_212 | 1uek | A | 217 | 229 | RGRMRALGLRGVL | HHHHHHTT-EEEE | aaaaaaavxbvxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ibj_A_236 | 1ibj | A | PLPPYRIDOXAL-5'-PHOSPHATE | D - 253 |
1nh8_A_259 | 1nh8 | A | HISHISTIDINE | K - 272 |
1nh8_A_259 | 1nh8 | A | HISHISTIDINE | A - 273 |
1nh8_A_259 | 1nh8 | A | HISHISTIDINE | I - 274 |
1nh8_A_259 | 1nh8 | A | HISHISTIDINE | L - 275 |
Clusters included in this Subclass |
CLUSTER: HE.3.133 |
CLUSTER: HE.4.265 |