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Information on SUBCLASS 1.1.8
Subclass Accession number: 5274
Subclass: 1.1.8 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 18.5 +/- 16.0
Average RMSD (Å) : 0.700 +/- 0.122

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: XXGhp
(φψ)-conformation: aagbb
Pattern: x[DEGT][aelm][ALM][akrt][AR]x[G]x[ekr][AGVY][ilv][CLV]
Conservation:-0.769-0.145-0.6670.107-0.4120.367-0.4843.079-0.682-0.128-0.5890.0360.287
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1efv_A_361efv   A4153ITAATRLGGEVSCHHHHHTTTSEEEEaaaaaaavbxbbb
1ibj_A_2361ibj   A240252SEMAHAQGALVLVHHHHHTTT-EEEEaaaaaaavbxbbb
1nh8_A_2591nh8   A263275MDELAAIGAKAILHHHHHHTT-EEEEaaaaaaagxblxb
1o5i_A_411o5i   A4153EELLKRSGHRYVVHHHHHHT-SEEEEaaaaaaavbxbbx
1uek_A_2121uek   A217229RGRMRALGLRGVLHHHHHHTT-EEEEaaaaaaavxbvxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ibj_A_2361ibj   A     PLPPYRIDOXAL-5'-PHOSPHATE D - 253
1nh8_A_2591nh8   A     HISHISTIDINE K - 272
1nh8_A_2591nh8   A     HISHISTIDINE A - 273
1nh8_A_2591nh8   A     HISHISTIDINE I - 274
1nh8_A_2591nh8   A     HISHISTIDINE L - 275

Clusters included in this Subclass
CLUSTER: HE.3.133
CLUSTER: HE.4.265