Information on SUBCLASS 1.2.4 |
Subclass Accession number: 82
Subclass: 1.2.4 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 5.5 +/- 7.1 Average RMSD (Å) : 0.680 +/- 0.130 Consensus geometry
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Consensus Sequence: | XpXph |
(φψ)-conformation: | aapbb |
Pattern: | x | [lty] | x | [ehmr] | [nty] | [DKPR] | [DHQY] | x | [DENP] | [FIMV] | x |
Conservation: | -1.024 | -0.435 | -0.641 | -0.751 | -0.116 | 0.592 | 1.195 | -0.860 | 1.310 | 1.644 | -0.915 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cse_I_18 | 1cse | I | 25 | 35 | FTLHYPQYNVY | HHHH-TTSEEE | aaaaaaaxxbb |
1dbq_A_128 | 1dbq | A | 133 | 143 | MLEEYRHIPMV | HHHHTTTS-EE | aaaaaaaxwbb |
1dih_*_131 | 1dih | - | 144 | 154 | AKVMGDYTDIE | HHHHTTTSEEE | aaaaaaaxxxb |
1k8u_A_59 | 1k8u | A | 59 | 69 | DLDRNKDQEVN | HHHHTTT-EEE | aaaaaaaxxbx |
1mu5_A_180 | 1mu5 | A | 194 | 204 | TYIITPYAEFI | HHHH-TT-EEE | aaaaaaabbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1k8u_A_59 | 1k8u | A | MSESELENOMETHIONINE | D - 59 |
1k8u_A_59 | 1k8u | A | MSESELENOMETHIONINE | L - 60 |
1k8u_A_59 | 1k8u | A | MSESELENOMETHIONINE | D - 61 |
1k8u_A_59 | 1k8u | A | MSESELENOMETHIONINE | R - 62 |
Clusters included in this Subclass |
CLUSTER: HE.3.141 |
CLUSTER: HE.5.102 |