Information on SUBCLASS 1.2.8 |
Subclass Accession number: 5284
Subclass: 1.2.8 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 9 Average sequence ID (%) : 11.7 +/- 18.9 Average RMSD (Å) : 0.644 +/- 0.073 Consensus geometry
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Consensus Sequence: | pXchX |
(φψ)-conformation: | aalpb |
Pattern: | x | [akqr] | [aikm] | [dekqrs] | x | [DGKN] | [AFILVWY] | x | [altv] |
Conservation: | -1.468 | 0.477 | -0.302 | 0.604 | -0.776 | 2.045 | -0.037 | -0.609 | 0.065 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a70_*_66 | 1a70 | - | 67 | 75 | DQIDEGWVL | HHHHHTEEE | aaaaagxbb |
1af7_*_157 | 1af7 | - | 161 | 169 | EKARSGIYR | HHHHHTEEE | aaaaavxbx |
1frr_A_65 | 1frr | A | 66 | 74 | GQMEEGFVL | HHHHTTEEE | aaaaagxbx |
1iue_A_66 | 1iue | A | 67 | 75 | EQIKKKYIL | HHHHTTEEE | aaaaavxbb |
1kol_A_358 | 1kol | A | 358 | 366 | IAEVVGVQV | HHHHHTEEE | aaaaavpbx |
1np7_A_88 | 1np7 | A | 95 | 103 | IAKQINAKT | HHHHTTEEE | aaaaavxab |
1sur_*_136 | 1sur | - | 142 | 150 | ALKELNAQT | HHHHTTEEE | aaaaalxab |
1xaa_*_86 | 1xaa | - | 93 | 101 | LRKSQDLFA | HHHHTTEEE | aaaaalxab |
1xad_*_86 | 1xad | - | 93 | 101 | IRKQLDLFA | HHHHTTEEE | aaaaalxab |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1a70_*_66 | 1a70 | * | FESFE2/S2 (INORGANIC) CLUSTER | L - 75 |
1af7_*_157 | 1af7 | * | SAHS-ADENOSYL-L-HOMOCYSTEINE | V - 159 |
1frr_A_65 | 1frr | A | FESFE2/S2 (INORGANIC) CLUSTER | L - 74 |
Clusters included in this Subclass |
CLUSTER: HE.1.29 |