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Information on SUBCLASS 1.2.8
Subclass Accession number: 5284
Subclass: 1.2.8 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 9

Average sequence ID (%) : 11.7 +/- 18.9
Average RMSD (Å) : 0.644 +/- 0.073

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: pXchX
(φψ)-conformation: aalpb
Pattern: x[akqr][aikm][dekqrs]x[DGKN][AFILVWY]x[altv]
Conservation:-1.4680.477-0.3020.604-0.7762.045-0.037-0.6090.065
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a70_*_661a70   -6775DQIDEGWVLHHHHHTEEEaaaaagxbb
1af7_*_1571af7   -161169EKARSGIYRHHHHHTEEEaaaaavxbx
1frr_A_651frr   A6674GQMEEGFVLHHHHTTEEEaaaaagxbx
1iue_A_661iue   A6775EQIKKKYILHHHHTTEEEaaaaavxbb
1kol_A_3581kol   A358366IAEVVGVQVHHHHHTEEEaaaaavpbx
1np7_A_881np7   A95103IAKQINAKTHHHHTTEEEaaaaavxab
1sur_*_1361sur   -142150ALKELNAQTHHHHTTEEEaaaaalxab
1xaa_*_861xaa   -93101LRKSQDLFAHHHHTTEEEaaaaalxab
1xad_*_861xad   -93101IRKQLDLFAHHHHTTEEEaaaaalxab
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a70_*_661a70   *     FESFE2/S2 (INORGANIC) CLUSTER L - 75
1af7_*_1571af7   *     SAHS-ADENOSYL-L-HOMOCYSTEINE V - 159
1frr_A_651frr   A     FESFE2/S2 (INORGANIC) CLUSTER L - 74

Clusters included in this Subclass
CLUSTER: HE.1.29