Information on SUBCLASS 1.3.3 |
Subclass Accession number: 98
Subclass: 1.3.3 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 10 Average sequence ID (%) : 17.0 +/- 16.7 Average RMSD (Å) : 0.560 +/- 0.171 Consensus geometry
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Consensus Sequence: | pXGhh |
(φψ)-conformation: | aagbb |
Pattern: | [deknqs] | x | [ailp] | x | [eknqrsty] | [adks] | [EG] | [fgilvy] | x |
Conservation: | -0.309 | -0.431 | -0.132 | -0.307 | -0.306 | -0.107 | 2.611 | -0.224 | -0.795 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ako_*_181 | 1ako | - | 188 | 196 | DRLMSWGLV | HHHHHTTEE | aaaaaagbb |
1czp_A_68 | 1czp | A | 68 | 76 | DDQIEAGYV | HHHHHTTEE | aaaaaagxb |
1f46_A_25 | 1f46 | A | 30 | 38 | NSIQQAGFI | HHHHHTTEE | aaaaaavxb |
1g0x_A_52 | 1g0x | A | 52 | 60 | QELVKKGQF | HHHHTTTEE | aaaaaavbb |
1gkm_A_116 | 1gkm | A | 123 | 131 | IALVNAEVY | HHHHHHTEE | aaaaaavbb |
1gpe_A_298 | 1gpe | A | 300 | 308 | LILEYSGIG | HHHHHTTEE | aaaaaavbe |
1ju2_A_258 | 1ju2 | A | 264 | 272 | QLLLLSGVG | HHHHHTTEE | aaaaaavbe |
1mju_L_122 | 1mju | L | 122 | 130 | SEQLTSGGA | HHHHTTTEE | aaaaaavbb |
1ne9_A_167 | 1ne9 | A | 174 | 182 | KRPFRDGVE | HHHHHTTEE | aaaaaavxb |
1v7c_A_38 | 1v7c | A | 38 | 46 | EEARKKGIR | HHHHTTTEE | aaaaaavbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1czp_A_68 | 1czp | A | FESFE2/S2 (INORGANIC) CLUSTER | L - 77 |
1gpe_A_298 | 1gpe | A | FADFLAVIN-ADENINE DINUCLEOTIDE | I - 301 |
1ju2_A_258 | 1ju2 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | G - 258 |
1ju2_A_258 | 1ju2 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | T - 259 |
1ju2_A_258 | 1ju2 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | G - 261 |
1ju2_A_258 | 1ju2 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | T - 262 |
1ju2_A_258 | 1ju2 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | Q - 264 |
1ju2_A_258 | 1ju2 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | L - 265 |
Clusters included in this Subclass |
CLUSTER: HE.1.25 |
CLUSTER: HE.1.44 |
CLUSTER: HE.2.57 |
CLUSTER: HE.2.94 |
CLUSTER: HE.3.112 |
CLUSTER: HE.3.130 |