Logo
Information on SUBCLASS 1.3.3
Subclass Accession number: 98
Subclass: 1.3.3 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 10

Average sequence ID (%) : 17.0 +/- 16.7
Average RMSD (Å) : 0.560 +/- 0.171

Consensus geometry
d (Å): 5 delta (°): 45-90 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: pXGhh
(φψ)-conformation: aagbb
Pattern: [deknqs]x[ailp]x[eknqrsty][adks][EG][fgilvy]x
Conservation:-0.309-0.431-0.132-0.307-0.306-0.1072.611-0.224-0.795
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ako_*_1811ako   -188196DRLMSWGLVHHHHHTTEEaaaaaagbb
1czp_A_681czp   A6876DDQIEAGYVHHHHHTTEEaaaaaagxb
1f46_A_251f46   A3038NSIQQAGFIHHHHHTTEEaaaaaavxb
1g0x_A_521g0x   A5260QELVKKGQFHHHHTTTEEaaaaaavbb
1gkm_A_1161gkm   A123131IALVNAEVYHHHHHHTEEaaaaaavbb
1gpe_A_2981gpe   A300308LILEYSGIGHHHHHTTEEaaaaaavbe
1ju2_A_2581ju2   A264272QLLLLSGVGHHHHHTTEEaaaaaavbe
1mju_L_1221mju   L122130SEQLTSGGAHHHHTTTEEaaaaaavbb
1ne9_A_1671ne9   A174182KRPFRDGVEHHHHHTTEEaaaaaavxb
1v7c_A_381v7c   A3846EEARKKGIRHHHHTTTEEaaaaaavbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1czp_A_681czp   A     FESFE2/S2 (INORGANIC) CLUSTER L - 77
1gpe_A_2981gpe   A     FADFLAVIN-ADENINE DINUCLEOTIDE I - 301
1ju2_A_2581ju2   A     FADFLAVIN-ADENINE DINUCLEOTIDE G - 258
1ju2_A_2581ju2   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 259
1ju2_A_2581ju2   A     FADFLAVIN-ADENINE DINUCLEOTIDE G - 261
1ju2_A_2581ju2   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 262
1ju2_A_2581ju2   A     FADFLAVIN-ADENINE DINUCLEOTIDE Q - 264
1ju2_A_2581ju2   A     FADFLAVIN-ADENINE DINUCLEOTIDE L - 265

Clusters included in this Subclass
CLUSTER: HE.1.25
CLUSTER: HE.1.44
CLUSTER: HE.2.57
CLUSTER: HE.2.94
CLUSTER: HE.3.112
CLUSTER: HE.3.130