Information on SUBCLASS 10.4.1 |
Subclass Accession number: 6000
Subclass: 10.4.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.11 (>75 %) 1.11.1 (>75 %) 1.11.1.6 GO : GO:0004096 (>75 %) GO:0004601 (>75 %) GO:0005509 (>75 %) GO:0016298 (>75 %) GO:0016684 (>75 %) GO:0016788 (>75 %) GO:0016789 (>75 %) SCOP : 48618 (>75 %) 48619 (>75 %) 48623 (>75 %) 56633 (>75 %) 56634 (>75 %) 56635 (>75 %) |
Number of loops: 5 Average sequence ID (%) : 73.1 +/- 11.5 Average RMSD (Å) : 0.540 +/- 0.152 Consensus geometry
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Consensus Sequence: | GphpDCNPKTXpYp |
(φψ)-conformation: | aapaabbaaappbb |
Pattern: | [A] | [T] | [D] | [R] | [C] | [C] | [F] | [AV] | [HQ] | [DK] | [C] | [C] | [Y] | [GK] | [KNRT] | [LV] | [NPT] | [DS] | [C] | [KN] | [HP] | [K] | [ST] | [AD] | [RT] | [Y] | [KST] | [Y] | [KS] |
Conservation: | -0.201 | 0.170 | 0.540 | 0.170 | 1.653 | 1.653 | 0.540 | -0.909 | -0.307 | -0.749 | 1.653 | 1.653 | 0.911 | -0.925 | -1.189 | -0.753 | -1.185 | -0.620 | 1.653 | -0.565 | -0.618 | 0.170 | -0.601 | -1.087 | -0.934 | 0.911 | -1.089 | 0.911 | -0.854 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1gmz_A_39 | 1gmz | A | 39 | 67 | ATDRCCFVHDCCYGKLTSCKPKTDRYSYS | HHHHHHHHHHHHHHT-TTS-TTT----EE | aaaaaaaaaaaaaaabaabbaaaxxxbbb |
1jlt_A_40 | 1jlt | A | 40 | 68 | ATDRCCFAQDCCYGRVNDCNPKTATYTYS | HHHHHHHHHHHHHHT--SS-TTT----EE | aaaaaaaaaaaaaaabaabxaaaxxxbbb |
1oqs_A_40 | 1oqs | A | 40 | 68 | ATDRCCFVHDCCYGTVNDCNPKTATYSYS | HHHHHHHHHHHHHHT--SS-TTT----EE | aaaaaaaaaaaaaaaxaabxaaaxxbbbb |
1s8i_A_40 | 1s8i | A | 40 | 68 | ATDRCCFVHKCCYKKLTDCNHKTDRYSYS | HHHHHHHHHHHHHHT--SS-TTT----EE | aaaaaaaaaaaaaaaxaabbaaaxxbxbb |
1skg_A_2040 | 1skg | A | 2040 | 2068 | ATDRCCFVHDCCYGNLPDCNPKSDRYKYK | HHHHHHHHHHHHHHT-TTS-TTT----EE | aaaaaaaaaaaaaaaaaabbaaaxxbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gmz_A_39 | 1gmz | A | IOH2-PROPANOL, ISOPROPANOL | C - 44 |
1gmz_A_39 | 1gmz | A | IOH2-PROPANOL, ISOPROPANOL | H - 47 |
1jlt_A_40 | 1jlt | A | MPD2-METHYL-2,4-PENTANEDIOL | Q - 48 |
1jlt_A_40 | 1jlt | A | MPD2-METHYL-2,4-PENTANEDIOL | D - 49 |
1jlt_A_40 | 1jlt | A | MPD2-METHYL-2,4-PENTANEDIOL | Y - 52 |
Clusters included in this Subclass |
CLUSTER: HE.12.2 |