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Information on SUBCLASS 10.4.1
Subclass Accession number: 6000
Subclass: 10.4.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.11 (>75 %)  1.11.1 (>75 %)  1.11.1.6
GO : GO:0004096 (>75 %)  GO:0004601 (>75 %)  GO:0005509 (>75 %)  GO:0016298 (>75 %)  GO:0016684 (>75 %)  GO:0016788 (>75 %)  GO:0016789 (>75 %)  
SCOP : 48618 (>75 %)  48619 (>75 %)  48623 (>75 %)  56633 (>75 %)  56634 (>75 %)  56635 (>75 %)  
Number of loops: 5

Average sequence ID (%) : 73.1 +/- 11.5
Average RMSD (Å) : 0.540 +/- 0.152

Consensus geometry
d (Å): 19 delta (°): 90-135 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: GphpDCNPKTXpYp
(φψ)-conformation: aapaabbaaappbb
Pattern: [A][T][D][R][C][C][F][AV][HQ][DK][C][C][Y][GK][KNRT][LV][NPT][DS][C][KN][HP][K][ST][AD][RT][Y][KST][Y][KS]
Conservation:-0.2010.1700.5400.1701.6531.6530.540-0.909-0.307-0.7491.6531.6530.911-0.925-1.189-0.753-1.185-0.6201.653-0.565-0.6180.170-0.601-1.087-0.9340.911-1.0890.911-0.854
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1gmz_A_391gmz   A3967ATDRCCFVHDCCYGKLTSCKPKTDRYSYSHHHHHHHHHHHHHHT-TTS-TTT----EEaaaaaaaaaaaaaaabaabbaaaxxxbbb
1jlt_A_401jlt   A4068ATDRCCFAQDCCYGRVNDCNPKTATYTYSHHHHHHHHHHHHHHT--SS-TTT----EEaaaaaaaaaaaaaaabaabxaaaxxxbbb
1oqs_A_401oqs   A4068ATDRCCFVHDCCYGTVNDCNPKTATYSYSHHHHHHHHHHHHHHT--SS-TTT----EEaaaaaaaaaaaaaaaxaabxaaaxxbbbb
1s8i_A_401s8i   A4068ATDRCCFVHKCCYKKLTDCNHKTDRYSYSHHHHHHHHHHHHHHT--SS-TTT----EEaaaaaaaaaaaaaaaxaabbaaaxxbxbb
1skg_A_20401skg   A20402068ATDRCCFVHDCCYGNLPDCNPKSDRYKYKHHHHHHHHHHHHHHT-TTS-TTT----EEaaaaaaaaaaaaaaaaaabbaaaxxbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gmz_A_391gmz   A     IOH2-PROPANOL, ISOPROPANOL C - 44
1gmz_A_391gmz   A     IOH2-PROPANOL, ISOPROPANOL H - 47
1jlt_A_401jlt   A     MPD2-METHYL-2,4-PENTANEDIOL Q - 48
1jlt_A_401jlt   A     MPD2-METHYL-2,4-PENTANEDIOL D - 49
1jlt_A_401jlt   A     MPD2-METHYL-2,4-PENTANEDIOL Y - 52

Clusters included in this Subclass
CLUSTER: HE.12.2