ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 11.4.1

Subclass Accession number: 6006
Subclass: 11.4.1

Type: HE alpha-beta
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 2.6 (>50 %)  2.6.1 (>50 %)  2.6.1.1 4.2 (>50 %)  4.2.2 (>50 %)  4.2.2.1
GO : GO:0004069 (>50 %)  GO:0008483 (>50 %)  GO:0016769 (>50 %)  GO:0016829 (>75 %)  GO:0016835 (>50 %)  GO:0016837 (>50 %)  GO:0016846 (>75 %)  GO:0016847 (>75 %)  GO:0030340 (>50 %)
SCOP : 48207 (>75 %)  48230 (>75 %)  48234 (>75 %)  53382 (>75 %)  53383 (>75 %)  53384 (>50 %)

Number of loops: 3

Average sequence ID (%) : 25.0 +/- 23.5
Average RMSD (Å) : 0.900 +/- 0.173

Consensus geometry

d (Å): 27

delta (°): 45-90

theta (°): 135-180

rho (°): 45-90

Consensus Sequence:	hpDXXhAXXhXXpXh
(φψ)-conformation:	aapaabppbppppbb

Pattern:	[TY]	[DKS]	[DT]	[I]	[ARS]	x	[AM]	[KNQ]	[AKS]	[IL]	[LV]	[DNS]	[D]	[APS]	[GST]	[IV]	[A]	[PST]	[AKV]	[AP]	x	[KPT]	[NS]	x	[LY]	[KS]	[AQT]	[FY]
Conservation:	0.107	-0.613	0.196	1.361	-0.785	-0.898	-0.207	-0.184	-0.613	0.622	0.252	-0.012	2.906	-0.613	-0.613	0.991	1.361	-0.527	-1.128	0.355	-1.299	-0.785	0.495	-1.299	-0.123	0.004	-0.870	1.918

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1f1s_A_600	1f1s	A	600	627	YSDIANMNKLLNDSTVATKPLKSNLSTF	HHHHHHHHHHHH-TTS-------EEEEE	aaaaaaaaaaaaxaabxxbpxbxbbbbx
1j0m_A_366	1j0m	A	366	393	TDTIRLAKAIVDDPSIAPAAAPNLYKQY	HHHHHHHHHHHT-TT--------EEEEE	aaaaaaaaaaaaxaabxxxxxwbbbbbx
1n7o_A_520	1n7o	A	520	547	YKDISLMQSLLSDAGVASVPRTSYLSAF	HHHHHHHHHHHH-TTS-------EEEEE	aaaaaaaaaaaaxaaxxbbpxxxbbbxx

Clusters included in this Subclass