Information on SUBCLASS 2.2.12 |
Subclass Accession number: 8211
Subclass: 2.2.12 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 8 Average sequence ID (%) : 12.0 +/- 13.7 Average RMSD (Å) : 0.775 +/- 0.225 Consensus geometry
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Consensus Sequence: | ppXpXX |
(φψ)-conformation: | aapabb |
Pattern: | [egk] | [afltv] | [aflvw] | x | x | x | [AFILW] | [eknrst] | [dhkt] | [ast] | [dehk] | x | [ailtv] | [agiv] |
Conservation: | 1.136 | -0.314 | -0.623 | -0.952 | -1.242 | -1.191 | 0.024 | 0.201 | -0.268 | 1.934 | 1.543 | -0.768 | 0.705 | -0.186 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1iwe_A_46 | 1iwe | A | 48 | 61 | KVVDLLATDADIVS | HHHHHHHTT-SEEE | aaaaaaaaaxabbb |
1izo_A_105 | 1izo | A | 120 | 133 | KAAVTRWEKADEVV | HHHHHHHTTSSEEE | aaaaaaaaaxabbb |
1l7d_A_247 | 1l7d | A | 249 | 262 | EAVLKELVKTDIAI | HHHHHHHTT-SEEE | aaaaaaaaaxabbb |
1one_A_303 | 1one | A | 304 | 317 | EAWSHFFKTAGIQI | HHHHHHHTT--SEE | aaaaaaaaaxabpb |
1psd_A_44 | 1psd | A | 45 | 58 | EQLKESIRDAHFIG | HHHHHHHTT-SEEE | aaaaaaaaaxabbb |
1pvd_A_124 | 1pvd | A | 124 | 137 | VFHRMSANISETTA | HHHHHHGGG-SEEE | aaaaaaaaababbb |
1vpe_*_298 | 1vpe | - | 302 | 315 | ELFKQKLSDAKTVV | HHHHHHHTT-SEEE | aaaaaaaaaxabbb |
2cev_A_102 | 2cev | A | 104 | 117 | GTLAGVAKHYERLG | HHHHHHHTT-SSEE | aaaaaaaaababxx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1iwe_A_46 | 1iwe | A | ACTACETATE ION | K - 46 |
1iwe_A_46 | 1iwe | A | IMPINOSINIC ACID | K - 46 |
1iwe_A_46 | 1iwe | A | ACTACETATE ION | G - 47 |
1izo_A_105 | 1izo | A | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 111 |
1vpe_*_298 | 1vpe | * | ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | N - 317 |
2cev_A_102 | 2cev | A | MNMANGANESE (II) ION | W - 120 |
Clusters included in this Subclass |
CLUSTER: HE.5.46 |