Information on SUBCLASS 2.2.12 |
Subclass Accession number: 132
Subclass: 2.2.12 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0016301 (>75 %) GO:0016772 (>75 %) GO:0016776 (>75 %) SCOP : 53612 (>75 %) 53613 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 12.7 +/- 12.9 Average RMSD (Å) : 0.800 +/- 0.200 Consensus geometry
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Consensus Sequence: | XpcXXV |
(φψ)-conformation: | aagpbb |
Pattern: | [AT] | [AL] | [DES] | [AGV] | [CL] | [EQS] | x | [ILV] | [AER] | [AQ] | [NRS] | [DGN] | [AGR] | x | [V] | [KTV] | [DER] | x | [AV] | [GQS] | [FIP] |
Conservation: | 0.786 | 0.098 | 0.544 | -0.857 | 0.799 | 0.417 | -1.238 | 1.180 | -0.602 | 0.581 | 0.035 | 0.417 | -0.729 | -1.238 | 2.708 | -0.857 | 0.162 | -0.857 | 0.620 | -0.475 | -1.493 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1f9z_A_82 | 1f9z | A | 82 | 102 | AAEACEKIRQNGGNVTREAGP | HHHHHHHHHHTT-EEEEEEEE | aaaaaaaaaaagpbbabppep |
1qb7_A_153 | 1qb7 | A | 155 | 175 | ALSGLQLVEASDAVVVEMVSI | HHHHHHHHHHTT-EEEEEEEE | aaaaaaaaaaavbbxabbbba |
1vjp_A_213 | 1vjp | A | 217 | 237 | TADVLSHLAQRNRYVKDVAQF | HHHHHHHHHHTT-EEEEEEEE | aaaaaabgaaalxxxabbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1qb7_A_153 | 1qb7 | A | CITCITRIC ACID | T - 154 |
1qb7_A_153 | 1qb7 | A | MGMAGNESIUM ION | T - 154 |
1qb7_A_153 | 1qb7 | A | MGMAGNESIUM ION | A - 155 |
1qb7_A_153 | 1qb7 | A | ADEADENINE | L - 176 |
Clusters included in this Subclass |
CLUSTER: HE.3.164 |