Information on SUBCLASS 2.3.1 |
Subclass Accession number: 5363
Subclass: 2.3.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 47 Average sequence ID (%) : 11.5 +/- 14.1 Average RMSD (Å) : 0.634 +/- 0.230 Consensus geometry
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Consensus Sequence: | XXhpXh |
(φψ)-conformation: | aababb |
Pattern: | [afgilmvy] | x | [adegkqrst] | x | x | [dehknpqs] | x | [afgilpvy] | x | [acfgilmvwy] |
Conservation: | 0.921 | -0.534 | 0.612 | -0.630 | -0.097 | 2.192 | -1.280 | -0.219 | -0.737 | -0.229 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aog_A_379 | 1aog | A | 382 | 391 | ASKRYEVVAV | HHHH-SEEEE | aaaababbbb |
1aop_*_375 | 1aop | - | 382 | 391 | IAKIHKGDFR | HHHH-SSEEE | aaaaxabbbb |
1ccw_B_127 | 1ccw | B | 138 | 147 | VLEAVNLPLQ | HHHH-SS-EE | aaaababxbb |
1cjc_A_88 | 1cjc | A | 91 | 100 | LQDAYHAVVL | HHHHSSEEEE | aaaababbbx |
1dxh_A_90 | 1dxh | A | 97 | 106 | LGRMYDAIEY | HHHH-SEEEE | aaaababbbb |
1e5k_A_35 | 1e5k | A | 43 | 52 | LMTQLSHVVV | HHHH-S-EEE | aaaababbbb |
1e6c_A_126 | 1e6c | A | 143 | 152 | YQDVAHYVVD | HHHHH-SEEE | aaaaxabbbx |
1e8c_A_399 | 1e8c | A | 401 | 410 | AEEFADVAVV | HHHH-SEEEE | aaaababbbx |
1e9l_A_197 | 1e9l | A | 200 | 209 | LSQSLDYIQV | HHHH-SEEEE | aaaaxabbxx |
1eg7_A_1285 | 1eg7 | A | 1291 | 1300 | ALKLADYVVT | HHHH-SEEEE | aaaababbbb |
1ehy_A_252 | 1ehy | A | 258 | 267 | VPKYYSNYTM | HHHHBSSEEE | aaaababbbb |
1f5a_A_367 | 1f5a | A | 367 | 376 | FFQKYKHYIV | HHHH-SEEEE | aaNababbbb |
1gg4_A_410 | 1gg4 | A | 420 | 429 | LIAEQQVITI | HHHH-SSEEE | aaaababbbb |
1guq_A_124 | 1guq | A | 141 | 150 | LGKTYPWVQV | HHHH-SEEEE | aaaababbbx |
1gvn_B_175 | 1gvn | B | 194 | 203 | KTGLFSDIRL | HHT--S-EEE | aavaxabbbb |
1gz3_A_401 | 1gz3 | A | 407 | 416 | MASINERPVI | HHHH-SS-EE | aaaababxxb |
1h2b_A_197 | 1h2b | A | 206 | 215 | LKVMTPATVI | HHHH---EEE | aaaabaxxbb |
1h72_C_274 | 1h72 | C | 281 | 290 | LRDYYENTIR | HHHH-S-EEE | aaaabaxbbb |
1hjx_A_191 | 1hjx | A | 194 | 203 | ISQHLDFISI | HHHH-SEEEE | aaaaxabbxx |
1hk8_A_517 | 1hk8 | A | 527 | 536 | AAQHLDYFGV | HHHH-SEEEE | aaaababbbb |
1hkk_A_197 | 1hkk | A | 200 | 209 | IAQNLDFVNL | HHHH-SEEEE | aaaaxabbxx |
1hyu_A_365 | 1hyu | A | 374 | 383 | LAGIVEHVTL | HHHHBSEEEE | aaaababbbb |
1ihu_A_132 | 1ihu | A | 132 | 141 | LLTRFDHIIF | HHHH-SEEEE | aaaababbbb |
1itx_A_264 | 1itx | A | 267 | 276 | IAAIVDWINI | HHHHSSEEEE | aaaaxabbxx |
1jbw_A_348 | 1jbw | A | 355 | 364 | LTAAFSTVYL | HHHH-SEEEE | aaaababbbb |
1ji0_A_198 | 1ji0 | A | 201 | 210 | ALKVAHYGYV | HHHH-SEEEE | aaaaxabbbb |
1jih_A_129 | 1jih | A | 142 | 151 | FKSACDLVER | HHHH-S-EEE | aaaababbbx |
1k1e_A_112 | 1k1e | A | 114 | 123 | AFAACGTSFA | HHHHSSEEEE | aaaaxabbbb |
1kbz_A_162 | 1kbz | A | 169 | 178 | LAKERQTLSV | HHHH-SEEEE | aaaababbbb |
1m44_A_95 | 1m44 | A | 107 | 116 | MRGAYQLGAL | HHHH-SEEEE | aaaababxbb |
1mjf_A_199 | 1mjf | A | 209 | 218 | MKKVFDRVYY | HHHH-SEEEE | aaaaxabbbb |
1nnf_A_252 | 1nnf | A | 258 | 266 | LVAARAEYP. | HHHHS--EE. | aaaabaxxx. |
1o6b_A_16 | 1o6b | A | 25 | 34 | GAHIFEQVYV | HHHHSSEEEE | aaaaxabbbx |
1od6_A_14 | 1od6 | A | 23 | 32 | ASRLFEKVTV | HHHHSSEEEE | aaaababbbx |
1oth_A_145 | 1oth | A | 151 | 160 | LAKEASIPII | HHHH-SS-EE | aaaaxabpbb |
1owl_A_19 | 1owl | A | 24 | 33 | ARAQSAQLIG | HHHH-S-EEE | aaaabaxbbx |
1oxw_A_66 | 1oxw | A | 66 | 75 | LADYFDVIGG | HHHH-SEEEE | aaaababbbb |
1pbt_A_27 | 1pbt | A | 28 | 37 | LLEEKDKIFV | HHHH-S-EEE | aaaababbbb |
1phr_*_81 | 1phr | - | 81 | 90 | DFVTFDYILC | HHHH-SEEEE | aaaaxabbbb |
1qam_A_43 | 1qam | A | 48 | 57 | LVQRCNFVTA | HHHHSSEEEE | aaaababbbx |
1r89_A_72 | 1r89 | A | 83 | 92 | GKAVLDSYEI | HHHHSSSEEE | aaaababbbx |
1rif_A_141 | 1rif | A | 152 | 161 | YLENYEGKIL | HHHH-SSEEE | aaaabaxbbb |
1rjd_A_209 | 1rjd | A | 219 | 228 | IMSKFSHGLW | HHHH-SSEEE | aaaababbbb |
1rjd_A_72 | 1rjd | A | 92 | 101 | FLVANEKVQV | HHHH-SSEEE | aaaabaxbbb |
1s4n_A_166 | 1s4n | A | 172 | 181 | VTKAVSSEVK | HHHH-SS-EE | aaaaxabxbb |
1v8f_A_30 | 1v8f | A | 39 | 48 | ARRENPFVVV | HHHH-SEEEE | aaaababbbb |
2dap_*_123 | 2dap | - | 131 | 140 | AAAVLAEHQQ | HHHH-SSEEE | aaaaxabbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h2b_A_197 | 1h2b | A | NJ1COFACTOR BINDING SITE FOR CHAIN A | G - 197 |
1hjx_A_191 | 1hjx | A | CC5GOL BINDING SITE FOR CHAIN A | I - 191 |
1hjx_A_191 | 1hjx | A | BC8GOL BINDING SITE FOR CHAIN A | M - 204 |
1od6_A_14 | 1od6 | A | AC3SO4 BINDING SITE FOR CHAIN A | H - 16 |
1od6_A_14 | 1od6 | A | AC1PNS BINDING SITE FOR CHAIN A | L - 35 |
Clusters included in this Subclass |
CLUSTER: HE.2.48 |
CLUSTER: HE.2.55 |
CLUSTER: HE.3.19 |
CLUSTER: HE.4.26 |