Information on SUBCLASS 2.3.15 |
Subclass Accession number: 5377
Subclass: 2.3.15 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 6.1 (>75 %) 6.1.1 (>75 %) 6.1.1.10 SCOP : 52373 (>75 %) 52374 (>75 %) 52375 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 8.3 +/- 9.6 Average RMSD (Å) : 0.725 +/- 0.150 Consensus geometry
|
Consensus Sequence: | pXXpXX |
(φψ)-conformation: | aababb |
Pattern: | x | x | [AGVW] | x | x | [ALY] | [AKR] | [DPR] | [EFKL] | [FTV] | [DKT] | [ARS] | x | x |
Conservation: | -0.559 | -0.936 | -1.187 | -0.434 | -0.238 | 0.303 | 1.188 | 0.918 | -1.564 | 1.051 | 1.005 | 1.262 | -0.810 | -1.000 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dus_A_68 | 1dus | A | 68 | 80 | VIGIALADEVKST. | HHHHHHGGGSSEE. | aaaaaaaaababb. |
1fnn_A_56 | 1fnn | A | 62 | 75 | KLWELYKDKTTARF | HHHHHHTTS---EE | aaaaaaaaabaxbx |
1p9l_A_107 | 1p9l | A | 114 | 127 | HFAKQAARFFDSAE | HHHHHHGGG-SEEE | aaaaaaaaababbb |
1qgo_A_88 | 1qgo | A | 95 | 108 | REVQLLRPLFTRLT | HHHHHHGGGSSEEE | aaaaaaaaababbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dus_A_68 | 1dus | A | MSESELENOMETHIONINE | V - 68 |
1dus_A_68 | 1dus | A | MSESELENOMETHIONINE | I - 69 |
1dus_A_68 | 1dus | A | MSESELENOMETHIONINE | G - 70 |
1dus_A_68 | 1dus | A | MSESELENOMETHIONINE | I - 71 |
1dus_A_68 | 1dus | A | MSESELENOMETHIONINE | T - 80 |
1fnn_A_56 | 1fnn | A | MGMAGNESIUM ION | K - 56 |
1fnn_A_56 | 1fnn | A | ADPADENOSINE-5'-DIPHOSPHATE | K - 56 |
1fnn_A_56 | 1fnn | A | MGMAGNESIUM ION | T - 57 |
1fnn_A_56 | 1fnn | A | ADPADENOSINE-5'-DIPHOSPHATE | T - 57 |
1fnn_A_56 | 1fnn | A | MGMAGNESIUM ION | V - 58 |
1fnn_A_56 | 1fnn | A | ADPADENOSINE-5'-DIPHOSPHATE | V - 58 |
1fnn_A_56 | 1fnn | A | ADPADENOSINE-5'-DIPHOSPHATE | T - 59 |
1fnn_A_56 | 1fnn | A | MGMAGNESIUM ION | Y - 77 |
1p9l_A_107 | 1p9l | A | PDCPYRIDINE-2,6-DICARBOXYLIC ACID | H - 132 |
Clusters included in this Subclass |
CLUSTER: HE.6.158 |