Information on SUBCLASS 2.3.2 |
Subclass Accession number: 5364
Subclass: 2.3.2 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 20 Average sequence ID (%) : 11.7 +/- 14.5 Average RMSD (Å) : 0.680 +/- 0.196 Consensus geometry
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Consensus Sequence: | XXXpXh |
(φψ)-conformation: | aababb |
Pattern: | [afiklmv] | x | [adekqrs] | x | x | [DEPQRS] | x | [acfgilpv] | x |
Conservation: | 0.792 | -1.014 | 0.700 | -0.597 | -0.504 | 2.043 | -0.812 | 0.031 | -0.639 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a8y_*_23 | 1a8y | - | 26 | 34 | VFKKYEVLA | HHHH-SEEE | aaaababbb |
1coz_A_15 | 1coz | A | 24 | 32 | AKQLGDYLV | HHTTSSEEE | aaaababbb |
1dp4_A_196 | 1dp4 | A | 203 | 211 | VRRKGRVIY | HHHH-SEEE | aaaabaxbb |
1ff9_A_59 | 1ff9 | A | 65 | 73 | EVAKHDLVI | HHTTSSEEE | aaaababbb |
1iej_A_148 | 1iej | A | 152 | 160 | VAKFFSASC | HHHHSSEEE | aaaaxabbb |
1iib_A_44 | 1iib | A | 47 | 55 | KGQNADVVL | HHTT-SEEE | aaaaxabbb |
1iq7_A_480 | 1iq7 | A | 480 | 488 | FDEYFSEGC | HHHHSSEEE | aaaaxabeb |
1j23_A_64 | 1j23 | A | 71 | 79 | LKEAYSRPI | HHHH-SEEE | aaaababxb |
1jdp_A_199 | 1jdp | A | 206 | 214 | IQASERVVI | HHHH-SEEE | aaaababbb |
1js1_X_93 | 1js1 | X | 100 | 108 | MGCYCDIIG | HHHT-SEEE | aaaababbb |
1ojr_A_191 | 1ojr | A | 200 | 208 | EMQKHSLVL | HHTT-SEEE | aaaababbx |
1plq_*_141 | 1plq | - | 151 | 159 | LSQLSDSIN | HHTT-SEEE | aaaababbx |
1q5d_A_29 | 1q5d | A | 35 | 43 | LREATPIFY | HHHH-SEEE | aaaababbx |
1rwz_A_135 | 1rwz | A | 145 | 153 | ADKISDQVI | HHTT-SEEE | aaaababbb |
1rwz_A_8 | 1rwz | A | 18 | 26 | IVALVSEAR | HHTT-SEEE | aaaababbx |
1tpl_A_237 | 1tpl | A | 244 | 252 | MFSYADGCT | HHHTSSEEE | aaaababbb |
1uj2_A_143 | 1uj2 | A | 145 | 153 | VRDLFQMKL | HHHH-SEEE | aaaaxabbb |
1vj5_A_134 | 1vj5 | A | 143 | 151 | LKMHFDFLI | HHTTSSEEE | aaaababbb |
2cev_A_203 | 2cev | A | 214 | 222 | LKERTDGVH | HHTT-SEEE | aaaNbabbx |
2dnj_A_19 | 2dnj | A | 28 | 36 | IVRRYDIVL | HHHT-SEEE | aaaababbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1coz_A_15 | 1coz | A | CTPCYTIDINE-5'-TRIPHOSPHATE | G - 16 |
1coz_A_15 | 1coz | A | CTPCYTIDINE-5'-TRIPHOSPHATE | H - 17 |
1coz_A_15 | 1coz | A | CTPCYTIDINE-5'-TRIPHOSPHATE | L - 20 |
1coz_A_15 | 1coz | A | CTPCYTIDINE-5'-TRIPHOSPHATE | R - 23 |
1js1_X_93 | 1js1 | X | PO4PHOSPHATE ION | R - 110 |
1ojr_A_191 | 1ojr | A | ZNZINC ION | W - 209 |
1ojr_A_191 | 1ojr | A | PO4PHOSPHATE ION | W - 209 |
1ojr_A_191 | 1ojr | A | 2HADIHYDROXYACETONE | W - 209 |
2cev_A_203 | 2cev | A | MNMANGANESE (II) ION | D - 226 |
2dnj_A_19 | 2dnj | A | NAGN-ACETYL-D-GLUCOSAMINE | A - 19 |
2dnj_A_19 | 2dnj | A | NAGN-ACETYL-D-GLUCOSAMINE | T - 20 |
2dnj_A_19 | 2dnj | A | NAGN-ACETYL-D-GLUCOSAMINE | L - 21 |
PDB Site Annotated loops in this subclass |
Clusters included in this Subclass |
CLUSTER: HE.3.32 |