Logo
Information on SUBCLASS 2.3.3
Subclass Accession number: 135
Subclass: 2.3.3 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 11

Average sequence ID (%) : 11.9 +/- 15.8
Average RMSD (Å) : 0.709 +/- 0.192

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XphpXh
(φψ)-conformation: aapabb
Pattern: [fhilvy][deknqsy]xx[afily][dgnpqs][degknrs][ACMTV][ADEKQRS]x[AILV][FGIVY][ailpvy]
Conservation:-0.106-0.343-0.510-1.2100.132-0.402-0.4750.7480.950-0.6562.4390.650-1.216
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a7t_A_1851a7t   A192204VKAKFPSARYVVPHHHH-TT-SEEEEaaaaaaaxabbbx
1edq_A_3751edq   A375387YNVAQNSMDHIFLHHHHGGG-SEEEEaaaaaaababbxx
1iir_A_2951iir   A295307HQVLFGRVAAVIHHHHHGGGSSEEEEaaaaaaababbbb
1jje_A_1761jje   A183195LKSKYGKAKLVVPHHHHTTT-SEEEEaaaaaaaxabbbx
1jnd_A_231jnd   A2638LEIALQFCSHLVYHHHHGGG-SEEEEaaaaaaababbbx
1ko3_A_2421ko3   A249261IQQHYPEAQFVIPHHHH-TT--EEEEaaaaaaapabbbx
1m2x_A_2391m2x   A249261IQQKFSGAQYVVAHHHHTTT-SEEEEaaaaaaapabbbx
1p90_A_1551p90   A159171RVEQIQDCQVLYVHHHHTTT-SEEEEaaaaaaaxabbbb
1pv9_A_771pv9   A7890IYEILKNTETLGIHHHHTTT-SEEEEaaaaaaaxabbxb
1ua4_A_2191ua4   A219231FSEVIKNVQLAILHHHHGGG-SEEEEaaaaaaaxabbbb
2dap_*_522dap   -5264VDKHADDVDVLFLHHHHTTT-SEEEEaaaaaaababbxx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1m2x_A_2391m2x   A     GOLGLYCEROL V - 239

Clusters included in this Subclass
CLUSTER: HE.5.28
CLUSTER: HE.6.19