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Information on SUBCLASS 2.4.2
Subclass Accession number: 5388
Subclass: 2.4.2 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 22

Average sequence ID (%) : 15.3 +/- 17.0
Average RMSD (Å) : 0.505 +/- 0.219

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 45-90 rho (°): 135-180
Consensus Sequence: pXcXhp
(φψ)-conformation: aalabb
Pattern: [deknpqrst][aefklm][fiklv][adeknqrs][adegkqrst][gknqs]x[afiltv][ehkqsty]x
Conservation:-0.904-0.5061.059-0.253-0.2521.160-0.4401.812-0.367-1.311
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a28_A_9071a28   A918927PKILAGMVKPHHHHTT-EEEaaaaavabbx
1dm9_A_241dm9   A2938EMIEGGKVHYHHHHTT-EEEaaaaavabbb
1efd_N_2591efd   N259268PFVRAGRFQRHHHHTT-EEEaaaaavaxbx
1f7u_A_2991f7u   A308317LFKEKGLTHEHHHHTT-EEEaaaaavaxbx
1fiu_A_2591fiu   A267276IMVNGKRLKDHHHHTTSEEEaaaaalabbx
1gs4_A_9031gs4   A904913PKILSGKVKPHHHHTTSEEEaaaaavabbx
1i1n_A_1281i1n   A128137TLLSSGRVQLHHHHTSSEEEaaaaavabbb
1ile_*_1521ile   -164173NLFDRGLLYRHHHHTT-EEEaaaaalabbx
1ixk_A_931ixk   A93102PEFLTGLIYIHHHHTTSEEEaaaaavabbx
1jj2_O_371jj2   O4251ELVDEGAIQAHHHHTTSEEEaaaaavabbb
1jkx_A_1621jkx   A182191SWFADGRLKMHHHHTT-EEEaaaaavabbb
1kcf_A_1911kcf   A197206ELIDGQKILFHHHHTTSEEEaaaaalabbb
1ksk_A_151ksk   A2029REIRGNRVTVHHHHTT-EEEaaaaavabbb
1l1l_A_721l1l   A8796KLIYGLGATPHHHHTTSEEEaaaaavabbx
1meo_A_1621meo   A182191QLVASGTVQLHHHHHTSEEEaaaaavabbx
1p5h_A_3601p5h   A361370SLQKVGTVVEHHHHTTSEEEaaaaavabbx
1q7e_A_3501q7e   A351360SLRQSGSVVEHHHHTTSEEEaaaaavabbx
1r5l_A_931r5l   A94103GLLKAGYHGVHHHHTT-EEEaaaaavabbb
1rlr_*_1891rlr   -198206DAVSTFKIS.HHHHTTSEE.aaaaavabb.
1ual_A_201ual   A2433RAVKHNLLKVHHHHTTSEEEaaaaavabbb
1vio_A_151vio   A2029KAIRQSAVKIHHHHTT-EEEaaaaavabbb
2reb_*_2702reb   -277286LGVKEKLIEKHHHHTTSSEEaaaaalabbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a28_A_9071a28   A     STRPROGESTERONE M - 909
1ixk_A_931ixk   A     MSESELENOMETHIONINE Y - 101
1jkx_A_1621jkx   A     138N-[5'-O-PHOSPHONO-RIBOFURANOSYL]-2-[2-HYDROXY-2-[4-[GLUTAMIC ACID]-N-CARBONYLPHENYL]-3-[2-AMINO-4-HYDROXY -QUINAZOLIN-6-YL]-PROPANYLAMINO]-ACETAMIDE T - 166
1jkx_A_1621jkx   A     138N-[5'-O-PHOSPHONO-RIBOFURANOSYL]-2-[2-HYDROXY-2-[4-[GLUTAMIC ACID]-N-CARBONYLPHENYL]-3-[2-AMINO-4-HYDROXY -QUINAZOLIN-6-YL]-PROPANYLAMINO]-ACETAMIDE V - 169
1jkx_A_1621jkx   A     138N-[5'-O-PHOSPHONO-RIBOFURANOSYL]-2-[2-HYDROXY-2-[4-[GLUTAMIC ACID]-N-CARBONYLPHENYL]-3-[2-AMINO-4-HYDROXY -QUINAZOLIN-6-YL]-PROPANYLAMINO]-ACETAMIDE Q - 170
1jkx_A_1621jkx   A     138N-[5'-O-PHOSPHONO-RIBOFURANOSYL]-2-[2-HYDROXY-2-[4-[GLUTAMIC ACID]-N-CARBONYLPHENYL]-3-[2-AMINO-4-HYDROXY -QUINAZOLIN-6-YL]-PROPANYLAMINO]-ACETAMIDE E - 173
1jkx_A_1621jkx   A     138N-[5'-O-PHOSPHONO-RIBOFURANOSYL]-2-[2-HYDROXY-2-[4-[GLUTAMIC ACID]-N-CARBONYLPHENYL]-3-[2-AMINO-4-HYDROXY -QUINAZOLIN-6-YL]-PROPANYLAMINO]-ACETAMIDE H - 174
1meo_A_1621meo   A     PO4PHOSPHATE ION K - 170
1meo_A_1621meo   A     PO4PHOSPHATE ION H - 174
1r5l_A_931r5l   A     MSESELENOMETHIONINE I - 93
1r5l_A_931r5l   A     MSESELENOMETHIONINE L - 96
1r5l_A_931r5l   A     MSESELENOMETHIONINE K - 97
1r5l_A_931r5l   A     MSESELENOMETHIONINE G - 99
1r5l_A_931r5l   A     MSESELENOMETHIONINE Y - 100
1r5l_A_931r5l   A     VIV(2R)-2,5,7,8-TETRAMETHYL-2-[(4R,8R)-4,8,12-TRIMETHYLTRIDECYL]CHROMAN-6-OL Y - 100
1r5l_A_931r5l   A     MSESELENOMETHIONINE H - 101
1r5l_A_931r5l   A     MSESELENOMETHIONINE G - 102

Clusters included in this Subclass
CLUSTER: HE.2.29
CLUSTER: HE.3.46
CLUSTER: HE.4.40