Information on SUBCLASS 2.4.4 |
Subclass Accession number: 8243
Subclass: 2.4.4 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 11 Average sequence ID (%) : 12.6 +/- 16.9 Average RMSD (Å) : 0.718 +/- 0.160 Consensus geometry
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Consensus Sequence: | pXhpXh |
(φψ)-conformation: | aababb |
Pattern: | [degknq] | x | [ailm] | x | x | x | x | [DEKN] | x | [afgvy] | [DEPS] | [aegknrst] | [ILTV] | [agilvy] |
Conservation: | -0.033 | -0.406 | -0.221 | -1.071 | -0.757 | 0.087 | -0.583 | 1.990 | -0.703 | -0.288 | 1.640 | -0.460 | 1.617 | -0.812 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ej2_A_17 | 1ej2 | A | 21 | 34 | QVIKSILEEVDELI | HHHHHHTTT-SEEE | aaaaaaaaababbx |
1gdh_A_36 | 1gdh | A | 37 | 50 | DEMIETAKSVDALL | HHHHHHHTT-SEEE | aaaaaaaaababbb |
1gqo_A_53 | 1gqo | A | 58 | 71 | DAIHEAEEQYSGIV | HHHHHHTTT-SEEE | aaaaaaaaNbabbb |
1iy9_A_197 | 1iy9 | A | 202 | 215 | NVQRDVKEIFPITK | HHHHHHHTT-SEEE | aaaaaaaaababbb |
1izo_A_105 | 1izo | A | 120 | 133 | KAAVTRWEKADEVV | HHHHHHHTTSSEEE | aaaaaaaaaxabbb |
1php_*_198 | 1php | - | 203 | 216 | GVIDNLLEKVDNLI | HHHHHHTTT-SEEE | aaaaaaaaaxabbb |
1pvd_A_124 | 1pvd | A | 124 | 137 | VFHRMSANISETTA | HHHHHHGGG-SEEE | aaaaaaaaababbb |
1qpg_*_218 | 1qpg | - | 219 | 232 | QLIDNLLDKVDSII | HHHHHHTTT-SEEE | aaaaaaaaaxabbb |
1trb_*_155 | 1trb | - | 159 | 172 | EEALYLSNIASEVH | HHHHHHTTTSSEEE | aaaaaaaaaxabbb |
1vdc_*_155 | 1vdc | - | 159 | 172 | EEANFLTKYGSKVY | HHHHHHTTTSSEEE | aaaaaaaaaxabbx |
2cev_A_102 | 2cev | A | 104 | 117 | GTLAGVAKHYERLG | HHHHHHHTT-SSEE | aaaaaaaaababxx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ej2_A_17 | 1ej2 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | R - 17 |
1ej2_A_17 | 1ej2 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | G - 18 |
1ej2_A_17 | 1ej2 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | H - 19 |
1ej2_A_17 | 1ej2 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | Q - 21 |
1ej2_A_17 | 1ej2 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | V - 22 |
1gqo_A_53 | 1gqo | A | GOLGLYCEROL | N - 73 |
1izo_A_105 | 1izo | A | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 111 |
1php_*_198 | 1php | * | ADPADENOSINE-5'-DIPHOSPHATE | D - 200 |
1php_*_198 | 1php | * | ADPADENOSINE-5'-DIPHOSPHATE | K - 201 |
2cev_A_102 | 2cev | A | MNMANGANESE (II) ION | W - 120 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1vdc_*_155 | 1vdc | * | ACTACTIVE SITE. | E - 159 |
Clusters included in this Subclass |
CLUSTER: HE.4.64 |
CLUSTER: HE.6.91 |