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Information on SUBCLASS 2.5.1
Subclass Accession number: 8248
Subclass: 2.5.1 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 25

Average sequence ID (%) : 12.1 +/- 16.1
Average RMSD (Å) : 0.732 +/- 0.214

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 45-90 rho (°): 90-135
Consensus Sequence: XXXXXX
(φψ)-conformation: aappbb
Pattern: [adeknqst]xxx[aegknqst][agiklmt][dehkprt]xx
Conservation:1.257-0.717-0.593-0.7481.687-0.6720.970-0.423-0.760
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ab4_*_4031ab4   -408416TALVANPWQHHHHHS-EEaaaaabpbx
1ad3_A_631ad3   A7785LPDWAEDEPHHHHHS-EEaaaaapxxx
1b9l_A_231b9l   A2331EEEINNRQDHHHHHS-EEaaaaabxbx
1bry_Y_111bry   Y2028NLREALPYEHHHHTS-EEaaaaaxxba
1e2k_A_3061e2k   A317325KRLRSMHVFHHHHT-EEEaaaaaxbxb
1e2t_A_221e2t   A3139AHNCAIPFEHHHHHS-EEaaaaaxxxb
1ekq_A_2571ekq   A259267DVQEWATIEHHHHH--EEaaaaaxbbb
1g5h_D_1381g5h   D147155NLLKTSGKLHHHHH--EEaaaaaxxbx
1gx3_A_221gx3   A3139AHNRSIPFEHHHHHS-EEaaaaabxxb
1ihu_A_2651ihu   A265273ADLAGLPTDHHHHTS-EEaaaaaxwbb
1j9q_A_61j9q   A715AEIAALPRQHHHHHS-EEaaaaaxxbb
1kbl_A_3831kbl   A384392AALKAGEVIHHHHHS-EEaaaaaxxxa
1l0l_B_4071l0l   B415423KKFVSGRKSHHHHHS-EEaaaaaxpbb
1lyx_A_1981lyx   A199207KQANQIRILHHHHHS-EEaaaaaxxbb
1m5y_A_3961m5y   A416424EQRASAYVKHHHHHS-EEaaaaaxxbb
1m6j_A_2071m6j   A208216EVAEATRIQHHHHHS-EEaaaaaxxbx
1me8_A_4661me8   A468476QLQSKAKITHHHHH--EEaaaaapbbb
1mrj_*_111mrj   -2028NLRKALPNEHHHHTS-EEaaaaaxwba
1msw_D_6901msw   D703711AKLLAAEVKHHHHHS-EEaaaaaxbxb
1ney_A_1981ney   A199207KAASELRILHHHHH--EEaaaaaxxbx
1np3_A_111np3   A1220SIIQGKKVAHHHHTS-EEaaaaabxbb
1or8_A_2081or8   A211219DVAIKEPLVHHHHTS-EEaaaaabpbb
1q44_A_141q44   A2230ALISSLPKEHHHHHS-EEaaaaaxpbb
1tph_1_1981tph   1199207AVAQSTRIIHHHHHS-EEaaaaaxxbb
3adk_*_23adk   -311EKLKKSKIIHHHHTS-EEaaaaaxxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ihu_A_2651ihu   A     ADPADENOSINE-5'-DIPHOSPHATE L - 275
1ihu_A_2651ihu   A     ADPADENOSINE-5'-DIPHOSPHATE F - 276
1lyx_A_1981lyx   A     PGA2-PHOSPHOGLYCOLIC ACID G - 209
1ney_A_1981ney   A     FTRFLUOROTRYPTOPHANE Y - 208
1ney_A_1981ney   A     13P1,3-DIHYDROXYACETONEPHOSPHATE G - 209
1or8_A_2081or8   A     UNKUNKNOWN L - 218
1or8_A_2081or8   A     UNKUNKNOWN D - 220
1tph_1_1981tph   1     PGHPHOSPHOGLYCOLOHYDROXAMIC ACID G - 209

Clusters included in this Subclass
CLUSTER: HE.1.16
CLUSTER: HE.2.23
CLUSTER: HE.2.80
CLUSTER: HE.3.38