Information on SUBCLASS 2.5.7 |
Subclass Accession number: 158
Subclass: 2.5.7 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : - (>75 %) |
Number of loops: 5 Average sequence ID (%) : 10.0 +/- 11.5 Average RMSD (Å) : 0.680 +/- 0.192 Consensus geometry
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Consensus Sequence: | pXpXXh |
(φψ)-conformation: | aababb |
Pattern: | [ALWY] | x | x | x | x | x | x | x | x | [GKQT] | [ARST] | [NY] | [ADPQT] | x | [FGLV] |
Conservation: | 0.815 | 0.639 | 0.109 | -0.245 | -0.603 | 0.049 | -1.317 | 0.401 | -1.163 | 0.090 | 0.712 | 2.603 | -0.328 | -1.262 | -0.500 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1g1t_A_12 | 1g1t | A | 12 | 26 | YDEASAYCQQRYTHL | HHHHHHHHHHHSSEE | aaaaaaaaaaababx |
1gq6_A_93 | 1gq6 | A | 100 | 114 | AQSHLSGLLKANAAF | HHHHHHHHHHHSSEE | aaaaaaaaaaababb |
1guq_A_124 | 1guq | A | 134 | 148 | WQEQTAELGKTYPWV | HHHHHHHHHHH-SEE | aaaaaaaaaaababb |
1m44_A_95 | 1m44 | A | 100 | 114 | LDAVEQVMRGAYQLG | HHHHHHHHHHH-SEE | aaaaaaaaaaababx |
1nh9_A_12 | 1nh9 | A | 15 | 29 | YVVAVLTQLTSNDEV | HHHHHHHHHHH-SEE | aaaaaaaaaaababb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1guq_A_124 | 1guq | A | GUDGLUCOSE-URIDINE-C1,5'-DIPHOSPHATE | F - 151 |
1guq_A_124 | 1guq | A | GUDGLUCOSE-URIDINE-C1,5'-DIPHOSPHATE | E - 152 |
1guq_A_124 | 1guq | A | GUDGLUCOSE-URIDINE-C1,5'-DIPHOSPHATE | N - 153 |
Clusters included in this Subclass |
CLUSTER: HE.1.29 |