Information on SUBCLASS 2.6.6 |
Subclass Accession number: 5419
Subclass: 2.6.6 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 8.8 +/- 10.3 Average RMSD (Å) : 0.825 +/- 0.206 Consensus geometry
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Consensus Sequence: | XphXhX |
(φψ)-conformation: | aabpbp |
Pattern: | [FKV] | x | x | [CTVY] | x | [EKL] | x | x | x | [EGKT] | x | [DP] | [AIV] | x | [AIVY] | x | x |
Conservation: | -0.366 | -0.552 | -1.697 | -0.142 | -0.224 | -0.399 | 0.316 | 0.160 | -0.633 | -0.470 | -0.552 | 2.558 | 1.683 | 0.260 | 0.185 | 0.916 | -1.042 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ad1_A_60 | 1ad1 | A | 67 | 83 | VLPVVEAIVGFDVKISV | HHHHHHHHTTSSSEEEE | aaaaaaaaaaxxbxbbb |
1j5p_A_58 | 1j5p | A | 61 | 77 | VKEYSLQILKNPVNYII | HHHHHHHHTTSSSEEEE | aaaaaaaaaabxbxbbb |
1lss_A_33 | 1lss | A | 33 | 49 | KDICKKASAEIDALVIN | HHHHHHHHHH-SSEEEE | aaaaaaaaaabxbxbbx |
1obb_A_155 | 1obb | A | 156 | 172 | FEGTTLVTRTVPIKAVG | HHHHHHHHHHS-SEEEE | aaaaaaaaaabxbxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1j5p_A_58 | 1j5p | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | P - 58 |
1j5p_A_58 | 1j5p | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | E - 59 |
1j5p_A_58 | 1j5p | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | A - 60 |
1j5p_A_58 | 1j5p | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | E - 63 |
1j5p_A_58 | 1j5p | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | Y - 64 |
1j5p_A_58 | 1j5p | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | I - 77 |
1lss_A_33 | 1lss | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | I - 35 |
1obb_A_155 | 1obb | A | CSWCYSTEINE-S-DIOXIDE | I - 155 |
1obb_A_155 | 1obb | A | MALMALTOSE | I - 155 |
1obb_A_155 | 1obb | A | CSWCYSTEINE-S-DIOXIDE | G - 172 |
Clusters included in this Subclass |
CLUSTER: HE.4.245 |