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Information on SUBCLASS 2.6.6
Subclass Accession number: 5419
Subclass: 2.6.6 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 8.8 +/- 10.3
Average RMSD (Å) : 0.825 +/- 0.206

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: XphXhX
(φψ)-conformation: aabpbp
Pattern: [FKV]xx[CTVY]x[EKL]xxx[EGKT]x[DP][AIV]x[AIVY]xx
Conservation:-0.366-0.552-1.697-0.142-0.224-0.3990.3160.160-0.633-0.470-0.5522.5581.6830.2600.1850.916-1.042
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ad1_A_601ad1   A6783VLPVVEAIVGFDVKISVHHHHHHHHTTSSSEEEEaaaaaaaaaaxxbxbbb
1j5p_A_581j5p   A6177VKEYSLQILKNPVNYIIHHHHHHHHTTSSSEEEEaaaaaaaaaabxbxbbb
1lss_A_331lss   A3349KDICKKASAEIDALVINHHHHHHHHHH-SSEEEEaaaaaaaaaabxbxbbx
1obb_A_1551obb   A156172FEGTTLVTRTVPIKAVGHHHHHHHHHHS-SEEEEaaaaaaaaaabxbxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1j5p_A_581j5p   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE P - 58
1j5p_A_581j5p   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE E - 59
1j5p_A_581j5p   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE A - 60
1j5p_A_581j5p   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE E - 63
1j5p_A_581j5p   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE Y - 64
1j5p_A_581j5p   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE I - 77
1lss_A_331lss   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE I - 35
1obb_A_1551obb   A     CSWCYSTEINE-S-DIOXIDE I - 155
1obb_A_1551obb   A     MALMALTOSE I - 155
1obb_A_1551obb   A     CSWCYSTEINE-S-DIOXIDE G - 172

Clusters included in this Subclass
CLUSTER: HE.4.245