Information on SUBCLASS 3.10.1 |
Subclass Accession number: 5529
Subclass: 3.10.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 9 Average sequence ID (%) : 13.2 +/- 17.9 Average RMSD (Å) : 0.644 +/- 0.235 Consensus geometry
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Consensus Sequence: | XXXXcXX |
(φψ)-conformation: | aapplbb |
Pattern: | [anv] | x | x | [alvy] | [ACGIKLT] | [aegkqr] | [cfiklv] | [depqrs] | [gkn] | [iltv] | [iklmtv] | [lpv] |
Conservation: | -0.330 | -0.469 | -1.761 | 0.489 | -1.376 | 0.226 | -0.894 | 0.394 | 1.421 | 1.419 | 0.372 | 0.508 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1kag_A_47 | 1kag | A | 67 | 78 | INELTEKQGIVL | HHHHHTSSSEEE | aaaaaaxbvbbb |
1lc5_A_263 | 1lc5 | A | 281 | 292 | YQALCQLPLLTV | HHHHHTSTTEEE | aaaaaaxxvbbb |
1m1n_B_71 | 1m1n | B | 76 | 87 | VLCALGFEKTMP | HHHHTTBTTEEE | aaaaaabxlbxw |
1mop_A_45 | 1mop | A | 51 | 62 | VRAAKRVPGSVV | HHHHHTSTTEEE | aaaaaaxpvxbb |
1ni4_B_133 | 1ni4 | B | 133 | 144 | AAWYGHCPGLKV | HHHHHTSTT-EE | aaaaaaxxvbbb |
1q5y_A_105 | 1q5y | A | 112 | 123 | ADDVIAQRGVRH | HHHHHTSTT-EE | aaaaaaxpgxbl |
1q98_A_61 | 1q98 | A | 67 | 78 | NQQAAKLSNTIV | HHHHHHSTTEEE | aaaaaaxplbbb |
1qgu_B_69 | 1qgu | B | 74 | 85 | VLCSLGFANTLP | HHHHHTBTTEEE | aaaaaabxlbbw |
1qxh_A_63 | 1qxh | A | 69 | 80 | NQLATEIDNTVV | HHHHHTSTTEEE | aaaaaaxplbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1m1n_B_71 | 1m1n | B | CLFFE(8)-S(7) CLUSTER | Q - 71 |
1m1n_B_71 | 1m1n | B | CLFFE(8)-S(7) CLUSTER | P - 72 |
1mop_A_45 | 1mop | A | EOHETHANOL | E - 45 |
1mop_A_45 | 1mop | A | EOHETHANOL | L - 48 |
1mop_A_45 | 1mop | A | EOHETHANOL | A - 49 |
1mop_A_45 | 1mop | A | EOHETHANOL | R - 52 |
1ni4_B_133 | 1ni4 | B | MSESELENOMETHIONINE | W - 135 |
1ni4_B_133 | 1ni4 | B | MSESELENOMETHIONINE | Y - 136 |
1qgu_B_69 | 1qgu | B | CLFFE(8)-S(7) CLUSTER | Q - 69 |
1qgu_B_69 | 1qgu | B | CLFFE(8)-S(7) CLUSTER | P - 70 |
Clusters included in this Subclass |
CLUSTER: HE.4.94 |