Information on SUBCLASS 3.2.10 |
Subclass Accession number: 5467
Subclass: 3.2.10 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 13.3 +/- 17.5 Average RMSD (Å) : 0.867 +/- 0.197 Consensus geometry
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Consensus Sequence: | XXchXhX |
(φψ)-conformation: | aalbpbb |
Pattern: | [aiklt] | x | [AKNT] | x | [IKLV] | [acfmv] | [AEQ] | x | [flmtv] | [dgn] | [flv] | [KPT] | [AFM] | [fgk] | [AFGY] | [agivy] | [adk] |
Conservation: | -1.200 | -0.690 | 0.275 | -0.243 | 0.458 | -0.926 | 1.641 | -0.481 | -0.334 | 1.442 | 0.346 | 1.822 | 0.695 | -0.844 | 0.314 | -1.609 | -0.665 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1c1d_A_49 | 1c1d | A | 62 | 78 | AMTLKMAVSNLPMGGGK | HHHHHHHHTT-S-EEEE | aaaaaaaaalbwbxbbb |
1hwx_A_101 | 1hwx | A | 110 | 126 | LMTYKCAVVDVPFGGAK | HHHHHHHHTT---EEEE | aaaaaaaaalbxbxxbb |
1j1u_A_79 | 1j1u | A | 88 | 104 | YNKKVFEAMGLKAKYVY | HHHHHHHHTT---EEEE | aaaaaaaaavbxbxxbx |
1p77_A_16 | 1p77 | A | 19 | 35 | IQNKLAAQTHQTMEYIA | HHHHHHHHTT--EEEEE | aaaaaaaaalbxbbbbb |
1qna_A_87 | 1qna | A | 96 | 112 | KYARIVQKLGFPAKFKD | HHHHHHHHTT-----EE | aaaaaaaaavbwxbbxl |
1ub7_A_89 | 1ub7 | A | 89 | 105 | TAALVQARFGLKAFAYD | HHHHHHHHTT---EEEE | aaaaaaaaalxxbxbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HE.4.152 |
CLUSTER: HE.6.196 |