Information on SUBCLASS 3.2.12 |
Subclass Accession number: 5469
Subclass: 3.2.12 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.2 (>50 %) 3.2.1 (>50 %) 3.2.1.83.5 (>75 %) GO : GO:0004372 (>75 %) GO:0008168 (>75 %) GO:0016741 (>75 %) GO:0016810 (>75 %) GO:0016814 (>75 %) GO:0019238 (>75 %) SCOP : 51445 (>50 %) 51487 (>50 %) 53926 (>75 %) 64197 (>75 %) 64198 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 32.1 +/- 32.2 Average RMSD (Å) : 0.550 +/- 0.191 Consensus geometry
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Consensus Sequence: | XhGhXhh |
(φψ)-conformation: | aalbpbb |
Pattern: | [IL] | [AKS] | [EQR] | [AE] | [IL] | [G] | [AIL] | [py] | [AIV] | [AVY] | [AI] | [GKS] | [ft] |
Conservation: | 0.741 | -0.394 | 0.229 | 0.027 | 0.741 | 2.757 | -0.456 | -0.915 | -0.187 | -0.709 | -0.211 | -0.540 | -1.084 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1g8m_A_238 | 1g8m | A | 254 | 266 | LKQALGIPAAASF | HHHHH-S-EEEEE | aaaaavbwbbbbb |
1j0a_A_28 | 1j0a | A | 30 | 42 | ISREIGADVYIKR | HHHHHTSEEEEEE | aaaaavbxbbbxx |
1j31_A_75 | 1j31 | A | 75 | 87 | LARELGLYIVAGT | HHHHHT-EEEEEE | aaaaavbbbbbxb |
1pkx_A_237 | 1pkx | A | 253 | 265 | LKEALGIPAAASF | HHHHHSS-EEEEE | aaaaavbwbbbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1g8m_A_238 | 1g8m | A | MSESELENOMETHIONINE | F - 238 |
1g8m_A_238 | 1g8m | A | GGUANOSINE-5'-MONOPHOSPHATE | F - 238 |
1g8m_A_238 | 1g8m | A | MSESELENOMETHIONINE | I - 239 |
1g8m_A_238 | 1g8m | A | GGUANOSINE-5'-MONOPHOSPHATE | I - 239 |
1g8m_A_238 | 1g8m | A | MSESELENOMETHIONINE | C - 242 |
1g8m_A_238 | 1g8m | A | MSESELENOMETHIONINE | A - 244 |
1g8m_A_238 | 1g8m | A | MSESELENOMETHIONINE | L - 245 |
1g8m_A_238 | 1g8m | A | MSESELENOMETHIONINE | W - 248 |
1g8m_A_238 | 1g8m | A | GGUANOSINE-5'-MONOPHOSPHATE | W - 248 |
1j31_A_75 | 1j31 | A | MSESELENOMETHIONINE | L - 75 |
1j31_A_75 | 1j31 | A | MSESELENOMETHIONINE | A - 76 |
1j31_A_75 | 1j31 | A | MSESELENOMETHIONINE | R - 77 |
1j31_A_75 | 1j31 | A | MSESELENOMETHIONINE | E - 78 |
1j31_A_75 | 1j31 | A | MSESELENOMETHIONINE | I - 83 |
Clusters included in this Subclass |
CLUSTER: HE.2.104 |