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Information on SUBCLASS 3.2.12
Subclass Accession number: 5469
Subclass: 3.2.12 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 3.2 (>50 %)  3.2.1 (>50 %)  3.2.1.83.5 (>75 %)  
GO : GO:0004372 (>75 %)  GO:0008168 (>75 %)  GO:0016741 (>75 %)  GO:0016810 (>75 %)  GO:0016814 (>75 %)  GO:0019238 (>75 %)  
SCOP : 51445 (>50 %)  51487 (>50 %)  53926 (>75 %)  64197 (>75 %)  64198 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 32.1 +/- 32.2
Average RMSD (Å) : 0.550 +/- 0.191

Consensus geometry
d (Å): 9 delta (°): 135-180 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XhGhXhh
(φψ)-conformation: aalbpbb
Pattern: [IL][AKS][EQR][AE][IL][G][AIL][py][AIV][AVY][AI][GKS][ft]
Conservation:0.741-0.3940.2290.0270.7412.757-0.456-0.915-0.187-0.709-0.211-0.540-1.084
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1g8m_A_2381g8m   A254266LKQALGIPAAASFHHHHH-S-EEEEEaaaaavbwbbbbb
1j0a_A_281j0a   A3042ISREIGADVYIKRHHHHHTSEEEEEEaaaaavbxbbbxx
1j31_A_751j31   A7587LARELGLYIVAGTHHHHHT-EEEEEEaaaaavbbbbbxb
1pkx_A_2371pkx   A253265LKEALGIPAAASFHHHHHSS-EEEEEaaaaavbwbbbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1g8m_A_2381g8m   A     MSESELENOMETHIONINE F - 238
1g8m_A_2381g8m   A     GGUANOSINE-5'-MONOPHOSPHATE F - 238
1g8m_A_2381g8m   A     MSESELENOMETHIONINE I - 239
1g8m_A_2381g8m   A     GGUANOSINE-5'-MONOPHOSPHATE I - 239
1g8m_A_2381g8m   A     MSESELENOMETHIONINE C - 242
1g8m_A_2381g8m   A     MSESELENOMETHIONINE A - 244
1g8m_A_2381g8m   A     MSESELENOMETHIONINE L - 245
1g8m_A_2381g8m   A     MSESELENOMETHIONINE W - 248
1g8m_A_2381g8m   A     GGUANOSINE-5'-MONOPHOSPHATE W - 248
1j31_A_751j31   A     MSESELENOMETHIONINE L - 75
1j31_A_751j31   A     MSESELENOMETHIONINE A - 76
1j31_A_751j31   A     MSESELENOMETHIONINE R - 77
1j31_A_751j31   A     MSESELENOMETHIONINE E - 78
1j31_A_751j31   A     MSESELENOMETHIONINE I - 83

Clusters included in this Subclass
CLUSTER: HE.2.104