Logo
Information on SUBCLASS 3.2.6
Subclass Accession number: 198
Subclass: 3.2.6 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 12.7 +/- 15.3
Average RMSD (Å) : 0.729 +/- 0.180

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: pXchXhX
(φψ)-conformation: aalppbb
Pattern: x[aekm]x[GILVW][chkqt][dkns][akrs][GKN][AIVY][KPQST][asv][aeqrt]
Conservation:-1.059-0.444-0.930-0.678-0.8390.0480.0832.0581.2990.6340.720-0.893
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1auo_A_1731auo   A180191FEHLKSRGVTVTHHHHHTTT--EEaaaaaaavxxbb
1ig8_A_1881ig8   A193204QKQITKRNIPIEHHHHHHTT--EEaaaaaaavxxbb
1in0_A_1041in0   A111122TKLVKDSKIKVQHHHHHHHT-SEEaaaaaaavpxbb
1j9j_A_1081j9j   A113124AMEGAMMNIPSIHHHHHHTT--EEaaaaaaalbwbb
1nh8_A_691nh8   A6980RDLVCDSGAQVRHHHHHHHT--EEaaaaaaavxxbx
1oyw_A_2461oyw   A253264AARLQSKGISAAHHHHHHTT--EEaaaaaaavxxbb
1rtq_A_2301rtq   A230241HASWHNAGYPAAHHHHHHTT--EEaaaaaaavbwbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1j9j_A_1081j9j   A     MGMAGNESIUM ION T - 109
1nh8_A_691nh8   A     AMPADENOSINE MONOPHOSPHATE D - 70
1nh8_A_691nh8   A     AMPADENOSINE MONOPHOSPHATE L - 71
1oyw_A_2461oyw   A     MSESELENOMETHIONINE T - 252
1oyw_A_2461oyw   A     MSESELENOMETHIONINE R - 255
1oyw_A_2461oyw   A     MSESELENOMETHIONINE L - 256
1oyw_A_2461oyw   A     MSESELENOMETHIONINE K - 259
1oyw_A_2461oyw   A     MSESELENOMETHIONINE I - 261

Clusters included in this Subclass
CLUSTER: HE.4.70