Information on SUBCLASS 3.2.8 |
Subclass Accession number: 5465
Subclass: 3.2.8 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 9 Average sequence ID (%) : 22.6 +/- 23.4 Average RMSD (Å) : 0.900 +/- 0.265 Consensus geometry
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Consensus Sequence: | hXchXhh |
(φψ)-conformation: | aalbpbb |
Pattern: | [atv] | x | [akl] | x | [AERS] | [alv] | [astv] | [DGNT] | [AKLV] | [nprt] | [filmpy] | [GIV] | [AGPT] | [agtv] |
Conservation: | 0.350 | -1.505 | 0.249 | -1.810 | 1.136 | 0.263 | 0.240 | 1.429 | 0.486 | -0.194 | -1.338 | -0.310 | 1.261 | -0.257 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1c1d_A_49 | 1c1d | A | 64 | 77 | TLKMAVSNLPMGGG | HHHHHHTT-S-EEE | aaaaaaalbwbxbb |
1gtm_A_79 | 1gtm | A | 90 | 103 | TWKTAVMDLPYGGG | HHHHHHTT-S-EEE | aaaaaaalxxbbbb |
1hrd_A_100 | 1hrd | A | 111 | 124 | AFKDSLTTLPMGGA | HHHHHHTSSS--EE | aaaaaaavxxbxbb |
1hwx_A_101 | 1hwx | A | 112 | 125 | TYKCAVVDVPFGGA | HHHHHHTT---EEE | aaaaaaalbxbxxb |
1iir_A_40 | 1iir | A | 40 | 52 | AERLAEVGVPHVP. | HHHHHHTT--EEE. | aaaaaaavbpbbx. |
1jvb_A_188 | 1jvb | A | 189 | 202 | QIAKAVSGATIIGV | HHHHHHT--EEEEE | aaaaaaavxxbbbb |
1k4i_A_153 | 1k4i | A | 158 | 171 | VELCRLAGKRPVAV | HHHHHHTT--SBEE | aaaaaaavxxwbbb |
1leh_A_51 | 1leh | A | 66 | 79 | TYKNAAAGLNLGGG | HHHHHHTT-S-EEE | aaaaaaavxbbxbb |
1pvy_A_164 | 1pvy | A | 169 | 182 | VALAELANLVPITT | HHHHHHTTS-SEEE | aaaaaaavbxxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HE.4.262 |
CLUSTER: HE.5.157 |
CLUSTER: HE.6.51 |