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Information on SUBCLASS 3.22.1
Subclass Accession number: 5564
Subclass: 3.22.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 46.9 +/- 10.2
Average RMSD (Å) : 0.533 +/- 0.208

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: hXXXcch
(φψ)-conformation: aabplbb
Pattern: [L]x[D][Q][V]x[L][L][ER][ACS][ACG][W]x[E][ILV][L][IM][AIM][GS][FL]x[HW][R][S][IM][ADE][HV][KP][DG][GK][IL][IL]
Conservation:0.429-1.0271.4360.9330.429-1.3070.4290.429-0.298-0.635-0.8593.956-1.0830.933-0.2430.429-0.143-0.971-0.222-0.374-1.0830.4830.9330.429-0.210-0.859-0.627-0.211-0.287-0.700-0.064-0.045
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1l2i_A_3721l2i   A372403LHDQVHLLECAWLEILMIGLVWRSMEHPGKLLHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEaaaaaaaaaaaaaaaaaaaaaaaaaabpvbbx
1mvc_A_2941mvc   A294325LDDQVILLRAGWNELLIASFSHRSIAVKDGILHHHHHHHHHHHHHHHHHHHHHHHTTTSSSEEEaaaaaaaaaaaaaaaaaaaaaaaaaaxxlbbb
1qkm_A_3241qkm   A324355LFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEaaaaaaaaaaaaaaaaaaaaaaaaaabpvbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1l2i_A_3721l2i   A     ETC(R,R)-5,11-CIS-DIETHYL-5,6,11,12-TETRAHYDROCHRYSENE-2, 8-DIOL W - 383
1l2i_A_3721l2i   A     ETC(R,R)-5,11-CIS-DIETHYL-5,6,11,12-TETRAHYDROCHRYSENE-2, 8-DIOL L - 384
1l2i_A_3721l2i   A     ETC(R,R)-5,11-CIS-DIETHYL-5,6,11,12-TETRAHYDROCHRYSENE-2, 8-DIOL L - 387
1l2i_A_3721l2i   A     ETC(R,R)-5,11-CIS-DIETHYL-5,6,11,12-TETRAHYDROCHRYSENE-2, 8-DIOL M - 388
1l2i_A_3721l2i   A     ETC(R,R)-5,11-CIS-DIETHYL-5,6,11,12-TETRAHYDROCHRYSENE-2, 8-DIOL L - 391
1l2i_A_3721l2i   A     ETC(R,R)-5,11-CIS-DIETHYL-5,6,11,12-TETRAHYDROCHRYSENE-2, 8-DIOL R - 394
1l2i_A_3721l2i   A     ETC(R,R)-5,11-CIS-DIETHYL-5,6,11,12-TETRAHYDROCHRYSENE-2, 8-DIOL L - 402
1l2i_A_3721l2i   A     ETC(R,R)-5,11-CIS-DIETHYL-5,6,11,12-TETRAHYDROCHRYSENE-2, 8-DIOL F - 404
1mvc_A_2941mvc   A     BM64-[2-(5,5,8,8-TETRAMETHYL-5,6,7,8-TETRAHYDRO-NAPHTHALEN-2-YL)-[1,3]DIOXOLAN-2-YL]-BENZOIC ACID W - 305
1mvc_A_2941mvc   A     BM64-[2-(5,5,8,8-TETRAMETHYL-5,6,7,8-TETRAHYDRO-NAPHTHALEN-2-YL)-[1,3]DIOXOLAN-2-YL]-BENZOIC ACID N - 306
1mvc_A_2941mvc   A     BM64-[2-(5,5,8,8-TETRAMETHYL-5,6,7,8-TETRAHYDRO-NAPHTHALEN-2-YL)-[1,3]DIOXOLAN-2-YL]-BENZOIC ACID E - 307
1mvc_A_2941mvc   A     BM64-[2-(5,5,8,8-TETRAMETHYL-5,6,7,8-TETRAHYDRO-NAPHTHALEN-2-YL)-[1,3]DIOXOLAN-2-YL]-BENZOIC ACID L - 309
1mvc_A_2941mvc   A     BM64-[2-(5,5,8,8-TETRAMETHYL-5,6,7,8-TETRAHYDRO-NAPHTHALEN-2-YL)-[1,3]DIOXOLAN-2-YL]-BENZOIC ACID I - 310
1mvc_A_2941mvc   A     BM64-[2-(5,5,8,8-TETRAMETHYL-5,6,7,8-TETRAHYDRO-NAPHTHALEN-2-YL)-[1,3]DIOXOLAN-2-YL]-BENZOIC ACID S - 312
1mvc_A_2941mvc   A     BM64-[2-(5,5,8,8-TETRAMETHYL-5,6,7,8-TETRAHYDRO-NAPHTHALEN-2-YL)-[1,3]DIOXOLAN-2-YL]-BENZOIC ACID F - 313
1mvc_A_2941mvc   A     BM64-[2-(5,5,8,8-TETRAMETHYL-5,6,7,8-TETRAHYDRO-NAPHTHALEN-2-YL)-[1,3]DIOXOLAN-2-YL]-BENZOIC ACID R - 316
1mvc_A_2941mvc   A     BM64-[2-(5,5,8,8-TETRAMETHYL-5,6,7,8-TETRAHYDRO-NAPHTHALEN-2-YL)-[1,3]DIOXOLAN-2-YL]-BENZOIC ACID I - 324
1mvc_A_2941mvc   A     BM64-[2-(5,5,8,8-TETRAMETHYL-5,6,7,8-TETRAHYDRO-NAPHTHALEN-2-YL)-[1,3]DIOXOLAN-2-YL]-BENZOIC ACID L - 325
1qkm_A_3241qkm   A     GENGENISTEIN W - 335
1qkm_A_3241qkm   A     GENGENISTEIN M - 336
1qkm_A_3241qkm   A     GENGENISTEIN L - 339
1qkm_A_3241qkm   A     GENGENISTEIN M - 340
1qkm_A_3241qkm   A     GENGENISTEIN G - 342
1qkm_A_3241qkm   A     GENGENISTEIN L - 343
1qkm_A_3241qkm   A     GENGENISTEIN R - 346

Clusters included in this Subclass
CLUSTER: HE.6.308