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Information on SUBCLASS 3.4.5
Subclass Accession number: 214
Subclass: 3.4.5 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 6.7 +/- 10.2
Average RMSD (Å) : 0.867 +/- 0.416

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XXXXphh
(φψ)-conformation: aabaabb
Pattern: [LPV][EGQ]x[LVY]x[EMR][AL][ARS][DGS]x[HIY][EP][DEK][GY][GLV][FIL][LV]x[APQ][AVY]
Conservation:-0.816-0.079-0.9630.069-1.258-0.5210.458-0.2260.216-0.6690.3632.3201.1000.953-1.5530.8061.658-0.963-0.374-0.521
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ewq_A_151ewq   A1736LQQYVELRDQYPDYLLLFQVHHHHHHHHHH-TTSEEEEEEaaaaaaaaaabaabxxbxxb
1i36_A_921i36   A92111PETVRMASSLIEKGGFVDAAHHHHHHHHHH-SSSEEEEEEaaaaaaaaaaxaabxbbxbb
1ufa_A_3181ufa   A333352VGLLERLAGRHPEGVILSPYHHHHHHHHHH-TT-EEEEEEaaaaaaaaaabaaxbxxbwb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ewq_A_151ewq   A     MSESELENOMETHIONINE V - 21
1ewq_A_151ewq   A     MSESELENOMETHIONINE R - 24
1ewq_A_151ewq   A     MSESELENOMETHIONINE D - 25
1i36_A_921i36   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE I - 112
1ufa_A_3181ufa   A     MSESELENOMETHIONINE H - 343
1ufa_A_3181ufa   A     MSESELENOMETHIONINE P - 344
1ufa_A_3181ufa   A     MSESELENOMETHIONINE E - 345
1ufa_A_3181ufa   A     MSESELENOMETHIONINE G - 346
1ufa_A_3181ufa   A     MSESELENOMETHIONINE L - 349
1ufa_A_3181ufa   A     MSESELENOMETHIONINE P - 351

Clusters included in this Subclass
CLUSTER: HE.3.103