Information on SUBCLASS 3.5.2 |
Subclass Accession number: 216
Subclass: 3.5.2 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 10 Average sequence ID (%) : 10.6 +/- 13.4 Average RMSD (Å) : 0.910 +/- 0.260 Consensus geometry
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Consensus Sequence: | XXcXXXX |
(φψ)-conformation: | aalbpbb |
Pattern: | [afilvy] | [agqrt] | x | x | x | [ceknrs] | [adekqt] | x | x | [AGKN] | x | [dekpt] | x | x | [acfgivw] | x |
Conservation: | 0.806 | -0.139 | -0.516 | -0.656 | -0.332 | -0.005 | 0.542 | -0.589 | -0.160 | 3.281 | -0.460 | 0.636 | -0.491 | -0.642 | -0.709 | -0.566 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a1v_A_232 | 1a1v | A | 238 | 253 | FGAYMSKAHGVDPNIR | HHHHHHHHHS---EEE | aaaaaaaaavbbxxbb |
1a3c_*_41 | 1a3c | - | 50 | 65 | LAERIEQIEGNPVTVG | HHHHHHHHHSS--EEE | aaaaaaaaavbpbxbb |
1b74_A_231 | 1b74 | A | 231 | 246 | LQFLIKLILGRDYPVK | HHHHHHHHHSS---EE | aaaaaaaaagbxbwbb |
1hc7_A_168 | 1hc7 | A | 182 | 197 | YARLAREYAAIPVIEG | HHHHHHHHH----EEE | aaaaaaaaalbwbbxb |
1jih_A_233 | 1jih | A | 248 | 263 | IRDSIKDILGYTTSCG | HHHHHHHHH----EEE | aaaaaaaaavxxbbbb |
1m55_A_50 | 1m55 | A | 63 | 78 | FLYEWNKFSKQESKFF | HHHHHHHHHTS---EE | aaaaaaaaalbxpxbb |
1nmo_A_139 | 1nmo | A | 142 | 157 | LASWIEARLGRKPLWC | HHHHHHHHHTS--EEE | aaaaaaaaavbxxxbb |
1q7e_A_178 | 1q7e | A | 184 | 198 | AALLHREKTGRGQRV. | HHHHHHHHHS---EE. | aaaaaaaaavbxbxb. |
1qlt_A_433 | 1qlt | A | 442 | 457 | VTKKRCQEAGLDFIGT | HHHHHHHHTT----EE | aaaaaaaaavbxxbbb |
1qu9_A_84 | 1qu9 | A | 90 | 105 | TYEAFFTEHNATFPAR | HHHHHHHHTT----EE | aaaaaaaaalbxxwxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1a3c_*_41 | 1a3c | * | SMSAMARIUM (III) ION | R - 49 |
1m55_A_50 | 1m55 | A | ZNZINC ION | Q - 73 |
1m55_A_50 | 1m55 | A | ZNZINC ION | E - 74 |
1m55_A_50 | 1m55 | A | ZNZINC ION | S - 75 |
1m55_A_50 | 1m55 | A | ZNZINC ION | K - 76 |
1m55_A_50 | 1m55 | A | ZNZINC ION | E - 82 |
1nmo_A_139 | 1nmo | A | MSESELENOMETHIONINE | E - 141 |
1q7e_A_178 | 1q7e | A | MSESELENOMETHIONINE | L - 178 |
1q7e_A_178 | 1q7e | A | MSESELENOMETHIONINE | L - 179 |
1q7e_A_178 | 1q7e | A | MSESELENOMETHIONINE | I - 180 |
1q7e_A_178 | 1q7e | A | MSESELENOMETHIONINE | G - 181 |
1q7e_A_178 | 1q7e | A | MSESELENOMETHIONINE | V - 198 |
1qu9_A_84 | 1qu9 | A | CSPS-PHOSPHOCYSTEINE | F - 84 |
1qu9_A_84 | 1qu9 | A | CSPS-PHOSPHOCYSTEINE | N - 88 |
1qu9_A_84 | 1qu9 | A | CSPS-PHOSPHOCYSTEINE | R - 105 |
Clusters included in this Subclass |
CLUSTER: HE.3.114 |
CLUSTER: HE.5.45 |