Information on SUBCLASS 3.5.3 |
Subclass Accession number: 5503
Subclass: 3.5.3 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 24 Average sequence ID (%) : 13.0 +/- 16.5 Average RMSD (Å) : 0.767 +/- 0.291 Consensus geometry
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Consensus Sequence: | XhchXhX |
(φψ)-conformation: | aalppbb |
Pattern: | x | x | x | x | x | [dgknr] | [afgilmv] | [dehknpqrst] | [afilpvy] | x | [dknqrswy] | x |
Conservation: | 0.131 | -0.211 | -0.049 | -0.195 | 0.259 | 2.514 | -0.251 | 0.209 | 0.875 | -1.093 | -0.948 | -1.242 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a9x_B_1771 | 1a9x | B | 1775 | 1786 | LALASGAKTVKM | HHHHTT--EEEE | aaaaagxbbbxx |
1db3_A_155 | 1db3 | A | 170 | 181 | YRESYGMYACNG | HHHHH---EEEE | aaaaavxxbbbb |
1dcp_A_43 | 1dcp | A | 56 | 67 | QAEKLDHHPEWF | HHHHHT---EEE | aaaaavbbxbbb |
1g0u_1_76 | 1g0u | 1 | 89 | 100 | QRRSKMNPLWNA | HHHHTT----EE | aaaaalbxxxbb |
1g6s_A_199 | 1g6s | A | 207 | 218 | LMKTFGVEIENQ | HHHHTT---EEE | aaaaavbbbbxx |
1gwc_A_16 | 1gwc | A | 24 | 35 | ALALKGLSYEDV | HHHHHT---EEE | aaaaavxxbxxb |
1i7q_B_86 | 1i7q | B | 91 | 102 | IVEAYGGQVGQA | HHHHTT-EEEEE | aaaaagxbbbpx |
1iho_A_153 | 1iho | A | 162 | 173 | MVADMGFDIEIV | HHHHHT---EEE | aaaaavxxbxxx |
1iyh_A_16 | 1iyh | A | 21 | 32 | IFAYLDIQYEDH | HHHHTT---EEE | aaaaalbxbxxx |
1jjf_A_233 | 1jjf | A | 242 | 253 | YCVANNINHVYW | HHHHTT---EEE | aaaaalbxbbbb |
1lou_A_16 | 1lou | A | 29 | 40 | AAENYGARVEKV | HHHHTT-EEEEE | aaaaavxxxabb |
1m0u_A_62 | 1m0u | A | 67 | 78 | LFAYGNQEYEDV | HHHHHT---EEE | aaaaalxxbxxx |
1mop_A_162 | 1mop | A | 171 | 182 | LVADFNLDVAVV | HHHHTT---EEE | aaaaalxxbxxb |
1okt_A_17 | 1okt | A | 22 | 33 | IFAYLGIEYTDK | HHHHHT---EEE | aaaaavxxbxxx |
1oyj_A_16 | 1oyj | A | 24 | 35 | AMAEKGLEFEYR | HHHHHT---EEE | aaaaavxxbxxb |
1pd2_1_16 | 1pd2 | 1 | 21 | 32 | IFAYLDIKYEDH | HHHHTT---EEE | aaaaalxxbxxx |
1pox_A_457 | 1pox | A | 459 | 470 | TQVQYHLPVINV | HHHHTT---EEE | aaaaalbwbxxb |
1q1g_A_132 | 1q1g | A | 141 | 152 | CAQELNVPVFNG | HHHHTT---EEE | aaaaalbwbxbe |
1qdl_B_85 | 1qdl | B | 90 | 101 | IGYAFGAKIRRA | HHHHTT-EEEEE | aaaaavxbbbxx |
1qs0_A_219 | 1qs0 | A | 227 | 238 | FAHVYRAPVILN | HHHHHT--EEEE | aaaaalxxbbxx |
1qw2_A_64 | 1qw2 | A | 64 | 74 | TSNKVGDIAVR. | HHHHTT--BEE. | aaaaavxxbbb. |
1rpn_A_149 | 1rpn | A | 164 | 175 | YRESFGLHASSG | HHHHH---EEEE | aaaaavxxbbbx |
1v2a_A_10 | 1v2a | A | 18 | 29 | LAKKLGITLNLK | HHHHHT---EEE | aaaaavxbbbpb |
1zpd_A_450 | 1zpd | A | 452 | 463 | QMVRLKLPVIIF | HHHHTT---EEE | aaaaalxwxxbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gwc_A_16 | 1gwc | A | AC1GTX BINDING SITE FOR CHAIN A | F - 17 |
Clusters included in this Subclass |
CLUSTER: HE.4.119 |
CLUSTER: HE.4.49 |
CLUSTER: HE.5.44 |
CLUSTER: HE.6.99 |