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Information on SUBCLASS 3.5.9
Subclass Accession number: 5509
Subclass: 3.5.9 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 11.5 +/- 12.1
Average RMSD (Å) : 0.575 +/- 0.150

Consensus geometry
d (Å): 15 delta (°): 135-180 theta (°): 135-180 rho (°): 225-270
Consensus Sequence: XpchXhX
(φψ)-conformation: aalppbb
Pattern: x[GV][CNR]xxxx[ADQT][KQST][GK]xx[AFV][KNPT][AIVY][ILMY]
Conservation:-1.2170.6720.035-0.108-1.320-0.123-0.612-0.6020.3203.0230.013-0.7050.177-0.295-0.0900.833
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b93_A_481b93   A4863TGNLISRATGMNVNAMHHHHHHHHH----EEEaaaaaaaaavxxbxxb
1mvo_A_611mvo   A6378EVCKQLRQQKLMFPILHHHHHHHHTT----EEaaaaaaaaavxbbwbb
1n7h_A_1351n7h   A143158AVRSHTIDSGRTVKYYHHHHHHHHH----EEEaaaaaaaaavxbbxbb
1nh8_A_1171nh8   A119134LVRKDLATKGIEATVIHHHHHHHHHT---EEEaaaaaaaaavbxbbxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1b93_A_481b93   A     FMTFORMIC ACID T - 48
1b93_A_481b93   A     FMTFORMIC ACID G - 49
1n7h_A_1351n7h   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE A - 160
1n7h_A_1351n7h   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 161
1n7h_A_1351n7h   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE S - 162

Clusters included in this Subclass
CLUSTER: HE.3.246
CLUSTER: HE.5.356