Information on SUBCLASS 3.5.9 |
Subclass Accession number: 5509
Subclass: 3.5.9 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 11.5 +/- 12.1 Average RMSD (Å) : 0.575 +/- 0.150 Consensus geometry
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Consensus Sequence: | XpchXhX |
(φψ)-conformation: | aalppbb |
Pattern: | x | [GV] | [CNR] | x | x | x | x | [ADQT] | [KQST] | [GK] | x | x | [AFV] | [KNPT] | [AIVY] | [ILMY] |
Conservation: | -1.217 | 0.672 | 0.035 | -0.108 | -1.320 | -0.123 | -0.612 | -0.602 | 0.320 | 3.023 | 0.013 | -0.705 | 0.177 | -0.295 | -0.090 | 0.833 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b93_A_48 | 1b93 | A | 48 | 63 | TGNLISRATGMNVNAM | HHHHHHHHH----EEE | aaaaaaaaavxxbxxb |
1mvo_A_61 | 1mvo | A | 63 | 78 | EVCKQLRQQKLMFPIL | HHHHHHHHTT----EE | aaaaaaaaavxbbwbb |
1n7h_A_135 | 1n7h | A | 143 | 158 | AVRSHTIDSGRTVKYY | HHHHHHHHH----EEE | aaaaaaaaavxbbxbb |
1nh8_A_117 | 1nh8 | A | 119 | 134 | LVRKDLATKGIEATVI | HHHHHHHHHT---EEE | aaaaaaaaavbxbbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1b93_A_48 | 1b93 | A | FMTFORMIC ACID | T - 48 |
1b93_A_48 | 1b93 | A | FMTFORMIC ACID | G - 49 |
1n7h_A_135 | 1n7h | A | NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | A - 160 |
1n7h_A_135 | 1n7h | A | NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | G - 161 |
1n7h_A_135 | 1n7h | A | NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | S - 162 |
Clusters included in this Subclass |
CLUSTER: HE.3.246 |
CLUSTER: HE.5.356 |