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Information on SUBCLASS 3.9.2
Subclass Accession number: 5528
Subclass: 3.9.2 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1 (>75 %)  2 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 20.8 +/- 18.2
Average RMSD (Å) : 0.800 +/- 0.383

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 45-90 rho (°): 45-90
Consensus Sequence: XXGXpph
(φψ)-conformation: aalbabb
Pattern: x[FHIL][AEGR][DST]x[FT][G][IKV][PRS][QS]xx
Conservation:-0.776-0.276-0.4190.355-0.7710.2902.725-0.014-0.1520.697-0.955-0.704
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1l3l_A_961l3l   A103114DHASDFGIRSGIHHHHTTT-SEEEaaaaaavbabbb
1mzj_A_391mzj   A4152WIETRTGIRSRRHHHHHH--SEEEaaaaaavxabbb
1rv1_A_811rv1   A8192LLGDLFGVPSFSHHHHHHT-SEEEaaaaaavbabbx
1v8c_A_81v8c   A819TFRDLTGKSQLEHHHHHHT-SEEEaaaaaavbabbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1l3l_A_961l3l   A     LAE3-OXO-OCTANOIC ACID (2-OXO-TETRAHYDRO-FURAN-3-YL)-AMIDE F - 101
1l3l_A_961l3l   A     LAE3-OXO-OCTANOIC ACID (2-OXO-TETRAHYDRO-FURAN-3-YL)-AMIDE Y - 102
1l3l_A_961l3l   A     LAE3-OXO-OCTANOIC ACID (2-OXO-TETRAHYDRO-FURAN-3-YL)-AMIDE A - 105
1l3l_A_961l3l   A     LAE3-OXO-OCTANOIC ACID (2-OXO-TETRAHYDRO-FURAN-3-YL)-AMIDE I - 110
1l3l_A_961l3l   A     MSESELENOMETHIONINE S - 112
1l3l_A_961l3l   A     MSESELENOMETHIONINE G - 113
1l3l_A_961l3l   A     MSESELENOMETHIONINE I - 114
1l3l_A_961l3l   A     MSESELENOMETHIONINE T - 115
1l3l_A_961l3l   A     LAE3-OXO-OCTANOIC ACID (2-OXO-TETRAHYDRO-FURAN-3-YL)-AMIDE T - 115
1mzj_A_391mzj   A     COACOENZYME A W - 41
1mzj_A_391mzj   A     COACOENZYME A I - 42
1mzj_A_391mzj   A     COACOENZYME A R - 45
1mzj_A_391mzj   A     COACOENZYME A T - 46
1rv1_A_811rv1   A     IMZCIS-[4,5-BIS-(4-BROMOPHENYL)-2-(2-ETHOXY-4-METHOXYPHENYL)-4,5-DIHYDROIMIDAZOL-1-YL]-[4-(2-HYDROXYETHYL)PIPERAZIN-1-YL]METHANONE F - 91

Clusters included in this Subclass
CLUSTER: HE.4.260