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Information on SUBCLASS 4.1.4
Subclass Accession number: 5590
Subclass: 4.1.4 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 17.5 +/- 18.7
Average RMSD (Å) : 0.637 +/- 0.320

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: pXXPphph
(φψ)-conformation: aabaapbb
Pattern: [FIL][chknrs][DEKNQ][afilt]x[DP][DEKS][AGILT][DEKRT][acfiy]x
Conservation:0.698-0.8420.375-0.759-0.9222.4170.637-0.6240.100-0.478-0.601
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1brt_*_2371brt   -240250FHKALPSAEYVHHHH-TTSEEEaaaabaaxxbb
1doz_A_541doz   A7181LNEIQDEITFKHHHH-SSEEEEaaaabaabbbb
1fp2_A_2011fp2   A206216ICETFPKLKCIHHHH-TT-EEEaaaabaaxxbb
1hkh_A_2391hkh   A242252FHQAVPEADYVHHHH-TTSEEEaaaabaaxxbb
1j3l_A_51j3l   A818LSDLYPEGEALHHHH-TTSEEEaaaabaaxbbb
1nhp_*_101nhp   -1929LLNLHPDAEIQHHHH-TTSEEEaaaabaaxxbb
1qzo_A_621qzo   A6272LKNRNPKLKTLHHHH-TT-EEEaaaabaaxbbb
1rpn_A_1031rpn   A112122IRQFSPETRFYHHHH-TTSEEEaaaabaaxxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1fp2_A_2011fp2   A     SAHS-ADENOSYL-L-HOMOCYSTEINE T - 202
1fp2_A_2011fp2   A     SAHS-ADENOSYL-L-HOMOCYSTEINE F - 218
1fp2_A_2011fp2   A     SAHS-ADENOSYL-L-HOMOCYSTEINE D - 219
1j3l_A_51j3l   A     MSESELENOMETHIONINE L - 18
1nhp_*_101nhp   *     FADFLAVIN-ADENINE DINUCLEOTIDE H - 10
1nhp_*_101nhp   *     FADFLAVIN-ADENINE DINUCLEOTIDE G - 11
1nhp_*_101nhp   *     FADFLAVIN-ADENINE DINUCLEOTIDE G - 12
1nhp_*_101nhp   *     FADFLAVIN-ADENINE DINUCLEOTIDE Y - 31
1nhp_*_101nhp   *     FADFLAVIN-ADENINE DINUCLEOTIDE E - 32
1rpn_A_1031rpn   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE A - 124
1rpn_A_1031rpn   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE S - 125
1rpn_A_1031rpn   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE T - 126
1rpn_A_1031rpn   A     GDPGUANOSINE-5'-DIPHOSPHATE T - 126

Clusters included in this Subclass
CLUSTER: HE.3.95