Information on SUBCLASS 4.1.4 |
Subclass Accession number: 5590
Subclass: 4.1.4 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 8 Average sequence ID (%) : 17.5 +/- 18.7 Average RMSD (Å) : 0.637 +/- 0.320 Consensus geometry
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Consensus Sequence: | pXXPphph |
(φψ)-conformation: | aabaapbb |
Pattern: | [FIL] | [chknrs] | [DEKNQ] | [afilt] | x | [DP] | [DEKS] | [AGILT] | [DEKRT] | [acfiy] | x |
Conservation: | 0.698 | -0.842 | 0.375 | -0.759 | -0.922 | 2.417 | 0.637 | -0.624 | 0.100 | -0.478 | -0.601 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1brt_*_237 | 1brt | - | 240 | 250 | FHKALPSAEYV | HHHH-TTSEEE | aaaabaaxxbb |
1doz_A_54 | 1doz | A | 71 | 81 | LNEIQDEITFK | HHHH-SSEEEE | aaaabaabbbb |
1fp2_A_201 | 1fp2 | A | 206 | 216 | ICETFPKLKCI | HHHH-TT-EEE | aaaabaaxxbb |
1hkh_A_239 | 1hkh | A | 242 | 252 | FHQAVPEADYV | HHHH-TTSEEE | aaaabaaxxbb |
1j3l_A_5 | 1j3l | A | 8 | 18 | LSDLYPEGEAL | HHHH-TTSEEE | aaaabaaxbbb |
1nhp_*_10 | 1nhp | - | 19 | 29 | LLNLHPDAEIQ | HHHH-TTSEEE | aaaabaaxxbb |
1qzo_A_62 | 1qzo | A | 62 | 72 | LKNRNPKLKTL | HHHH-TT-EEE | aaaabaaxbbb |
1rpn_A_103 | 1rpn | A | 112 | 122 | IRQFSPETRFY | HHHH-TTSEEE | aaaabaaxxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1fp2_A_201 | 1fp2 | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | T - 202 |
1fp2_A_201 | 1fp2 | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | F - 218 |
1fp2_A_201 | 1fp2 | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | D - 219 |
1j3l_A_5 | 1j3l | A | MSESELENOMETHIONINE | L - 18 |
1nhp_*_10 | 1nhp | * | FADFLAVIN-ADENINE DINUCLEOTIDE | H - 10 |
1nhp_*_10 | 1nhp | * | FADFLAVIN-ADENINE DINUCLEOTIDE | G - 11 |
1nhp_*_10 | 1nhp | * | FADFLAVIN-ADENINE DINUCLEOTIDE | G - 12 |
1nhp_*_10 | 1nhp | * | FADFLAVIN-ADENINE DINUCLEOTIDE | Y - 31 |
1nhp_*_10 | 1nhp | * | FADFLAVIN-ADENINE DINUCLEOTIDE | E - 32 |
1rpn_A_103 | 1rpn | A | NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | A - 124 |
1rpn_A_103 | 1rpn | A | NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | S - 125 |
1rpn_A_103 | 1rpn | A | NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | T - 126 |
1rpn_A_103 | 1rpn | A | GDPGUANOSINE-5'-DIPHOSPHATE | T - 126 |
Clusters included in this Subclass |
CLUSTER: HE.3.95 |