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Information on SUBCLASS 4.1.5
Subclass Accession number: 5591
Subclass: 4.1.5 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 14.0 +/- 15.7
Average RMSD (Å) : 0.625 +/- 0.296

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: pXhPpXXX
(φψ)-conformation: aabaapbb
Pattern: x[adekrt]xxx[PT][dehnt]xxxx
Conservation:-0.245-0.317-0.680-0.7350.1182.8660.140-0.190-0.452-0.5850.079
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1abr_A_941abr   A95105SDYLFTGTDQHHHHSSTTSEEEaaaabaabxxb
1ex2_A_421ex2   A5767VADLHPHAIVIHHHH-TTSEEEaaaabaaxbbb
1jw9_B_861jw9   B94104LTRINPHIAITHHHH-TTSEEEaaaabaabbbb
1kyz_A_2131kyz   A218228IVSKYPTIKGIHHHH-TTSEEEaaaabaaxxxb
1o20_A_2901o20   A292301TREIVPDVVP.HHHHSTTSEE.aaaabaaxpx.
1pjr_*_2701pjr   -270280FERDYPNAKVIHHHHSTT-EEEaaaabaapxbb
1pox_A_4251pox   A432442AKLNYPERQVFHHHH-TTS-EEaaaabaabxbb
1zpd_A_4181zpd   A425435YAVGAPERRNIHHHH-TTSEEEaaaabaaxxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ex2_A_421ex2   A     PO4PHOSPHATE ION K - 51
1ex2_A_421ex2   A     PO4PHOSPHATE ION K - 53
1ex2_A_421ex2   A     PO4PHOSPHATE ION K - 55
1ex2_A_421ex2   A     SUCSUCROSE L - 60
1ex2_A_421ex2   A     PO4PHOSPHATE ION G - 68
1ex2_A_421ex2   A     PO4PHOSPHATE ION A - 69
1ex2_A_421ex2   A     PO4PHOSPHATE ION D - 70
1kyz_A_2131kyz   A     SAHS-ADENOSYL-L-HOMOCYSTEINE V - 214
1kyz_A_2131kyz   A     SAHS-ADENOSYL-L-HOMOCYSTEINE F - 230
1kyz_A_2131kyz   A     SAHS-ADENOSYL-L-HOMOCYSTEINE D - 231
1pox_A_4251pox   A     TPPTHIAMINE DIPHOSPHATE A - 445
1pox_A_4251pox   A     MGMAGNESIUM ION G - 446
1pox_A_4251pox   A     TPPTHIAMINE DIPHOSPHATE G - 446
1zpd_A_4181zpd   A     DPXMONO-{4-[(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-AMINO]-2-HYDROXY-3-MERCAPTO-PENT-3-ENYL-PHOSPHONO} ESTER V - 438
1zpd_A_4181zpd   A     DPXMONO-{4-[(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-AMINO]-2-HYDROXY-3-MERCAPTO-PENT-3-ENYL-PHOSPHONO} ESTER G - 439
1zpd_A_4181zpd   A     MGMAGNESIUM ION G - 439

Clusters included in this Subclass
CLUSTER: HE.3.214
CLUSTER: HE.4.162
CLUSTER: HE.5.308