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Information on SUBCLASS 4.2.7
Subclass Accession number: 5603
Subclass: 4.2.7 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 15.2 +/- 14.1
Average RMSD (Å) : 0.567 +/- 0.058

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XXGXhpXh
(φψ)-conformation: aalababb
Pattern: [AGV][ACK][AR][KTV][G]x[IV][DRS]x[ALV][LVY]
Conservation:-0.564-0.4260.034-0.5642.625-0.5641.093-0.495-0.634-0.287-0.218
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1din_*_1241din   -132142VAAKGYVDRAVHHHHT-SSEEEaaaavababbb
1hzd_A_2451hzd   A248258AKAVGLISHVLHHHHTS-SEEEaaaavababbb
1oyw_A_1101oyw   A110120GCRTGQIRLLYHHHHT--SEEEaaaavababbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1din_*_1241din   *     CSD3-SULFINOALANINE L - 124
1din_*_1241din   *     CSD3-SULFINOALANINE G - 125
1din_*_1241din   *     CSD3-SULFINOALANINE G - 126
1din_*_1241din   *     CSD3-SULFINOALANINE A - 127
1din_*_1241din   *     CSD3-SULFINOALANINE L - 128
1din_*_1241din   *     CSD3-SULFINOALANINE Y - 144
1oyw_A_1101oyw   A     MSESELENOMETHIONINE G - 110
1oyw_A_1101oyw   A     MSESELENOMETHIONINE C - 111
1oyw_A_1101oyw   A     MSESELENOMETHIONINE R - 112
1oyw_A_1101oyw   A     MSESELENOMETHIONINE T - 113
1oyw_A_1101oyw   A     MSESELENOMETHIONINE G - 114
1oyw_A_1101oyw   A     MSESELENOMETHIONINE Q - 115
1oyw_A_1101oyw   A     MSESELENOMETHIONINE I - 116
1oyw_A_1101oyw   A     MSESELENOMETHIONINE Y - 120
1oyw_A_1101oyw   A     MSESELENOMETHIONINE I - 121

Clusters included in this Subclass
CLUSTER: HE.4.308