Information on SUBCLASS 4.26.1 |
Subclass Accession number: 8489
Subclass: 4.26.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 21.7 +/- 17.0 Average RMSD (Å) : 0.967 +/- 0.058 Consensus geometry
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Consensus Sequence: | XhGXXhXh |
(φψ)-conformation: | aalbppbb |
Pattern: | [AKR] | [FK] | [HNQ] | [ALV] | [AL] | x | [AGV] | [KR] | [ER] | [GV] | x | [HNR] | [AK] | [AY] | [G] | x | [DPS] | [APY] | x | [AV] | x | [FI] | x |
Conservation: | -0.265 | -0.378 | 0.376 | -0.448 | -0.164 | -0.815 | -0.815 | 1.426 | 0.702 | -0.671 | -0.436 | 0.376 | 0.166 | 0.552 | 3.400 | -0.436 | -0.357 | -0.998 | -0.147 | 0.252 | -1.090 | 0.951 | -1.181 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dii_A_403 | 1dii | A | 407 | 429 | KKQAAMAKRVLHKYGLDYVAEFI | HHHHHHHHHHHHHTT----EEEE | aaaaaaaaaaaaaavbxbbbbbb |
1h3f_A_198 | 1h3f | A | 198 | 220 | RFNLLVGREVQRAYGQSPQVCFL | HHHHHHHHHHHHHTT----EEEE | aaaaaaaaaaaaaavbxxpxbbb |
1n8f_A_243 | 1n8f | A | 243 | 265 | AKHVAEVKEGLNKAGLPAQVMID | HHHHHHHHHHHHHTT----EEEE | aaaaaaaaaaaaaavbpxbbbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dii_A_403 | 1dii | A | FADFLAVIN-ADENINE DINUCLEOTIDE | E - 427 |
1dii_A_403 | 1dii | A | FADFLAVIN-ADENINE DINUCLEOTIDE | I - 429 |
1h3f_A_198 | 1h3f | A | TYBTYROSINAL | N - 200 |
1n8f_A_243 | 1n8f | A | PEPPHOSPHOENOLPYRUVATE | D - 265 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h3f_A_198 | 1h3f | A | AC6TYB BINDING SITE FOR CHAIN A | N - 200 |
Clusters included in this Subclass |
CLUSTER: HE.7.126 |