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Information on SUBCLASS 4.26.1
Subclass Accession number: 319
Subclass: 4.26.1 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 12.8 +/- 16.5
Average RMSD (Å) : 0.714 +/- 0.353

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: pXXphXXX
(φψ)-conformation: aappbabb
Pattern: [deqry][afilp]x[ekqr]x[lmt][denq][AFGV][DEGT][adegt][iklv][hivwy][imv]
Conservation:-0.535-1.480-1.1460.942-0.1920.7060.7720.0040.920-1.0200.072-0.9081.865
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1chm_A_861chm   A8698QPWRRTVGTDNIVHHHHH--SSEEEEaaaaaxxbabbbb
1euh_A_4141euh   A419431GIAEQLEVGTVHIHHHHHS-SSEEEEaaaaaxxbabbbx
1ii7_A_3151ii7   A316328EIKELLNVEYLKIHHHHH---SEEEEaaaaaxxbabbbb
1j1i_A_881j1i   A97109DFIKAMNFDGKVSHHHHHS--SS-EEaaaaaxxbabxbx
1ky8_A_4321ky8   A437449RAVRLLEVGAIYIHHHHH--SSEEEEaaaaaxxbabbbx
1mjf_A_871mjf   A90102REVLQHDVDEVIMHHHTTS--SEEEEaaaaaxxxabbbb
1o04_A_4361o04   A441453YLSQALQAGTVWVHHHHH--SSEEEEaaaaaxxbabbxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1o04_A_4361o04   A     EDO1,2-ETHANEDIOL A - 439
1o04_A_4361o04   A     EDO1,2-ETHANEDIOL N - 440
1o04_A_4361o04   A     EDO1,2-ETHANEDIOL Y - 441
1o04_A_4361o04   A     EDO1,2-ETHANEDIOL L - 442
1o04_A_4361o04   A     EDO1,2-ETHANEDIOL S - 443
1o04_A_4361o04   A     EDO1,2-ETHANEDIOL Q - 444
1o04_A_4361o04   A     EDO1,2-ETHANEDIOL A - 445
1o04_A_4361o04   A     GAIGUANIDINE Q - 447

Clusters included in this Subclass
CLUSTER: HE.5.61