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Information on SUBCLASS 4.3.1
Subclass Accession number: 8426
Subclass: 4.3.1 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 11

Average sequence ID (%) : 12.3 +/- 16.0
Average RMSD (Å) : 1.018 +/- 0.204

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: XhchpXhh
(φψ)-conformation: aalpapbb
Pattern: xx[AILVY]xx[iltvy][akl][DEHKQ]x[ACFILMVWY][egkn][filptv][DEKNPST][degn]x[afimvy]x[afgimtv]
Conservation:-1.288-0.9160.946-0.446-0.6520.7110.2302.312-0.9420.0331.821-0.9140.821-0.523-0.366-0.4200.388-0.795
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a0c_A_2011a0c   A213230HMAVDYAKEIGFEGQFLIHHHHHHHHHTT--SEEEEaaaaaaaaaavxaxxxbb
1a0e_A_2011a0e   A213230RMAVDYAKRIGFTGQFLIHHHHHHHHHTT--SEEEEaaaaaaaaaalxaxxxbb
1doz_A_1961doz   A202219ESAKLIAEGAGVSEYAVGHHHHHHHHHHT---EEEEaaaaaaaaaavxabbbbb
1dqu_A_2171dqu   A225242VAIRAQADIMGTDLLAIAHHHHHHHHHTT---EEEEaaaaaaaaaalbapbxbx
1e6u_A_2531e6u   A255272ELAQTIAKVVGYKGRVVFHHHHHHHHHHT--SEEEEaaaaaaaaaavxaxbxbb
1ffw_A_151ffw   A1936RIVRNLLKELGFNNVEEAHHHHHHHHHTT---EEEEaaaaaaaaaavbaxbbbb
1jys_A_521jys   A5774LGATLLLEHCKPDVIINTHHHHHHHHHH--SEEEEEaaaaaaaaaalxabbbbb
1lar_A_17871lar   A17941811GQVHKTKEQFGQDGPITVHHHHHHHHHTT--S-EEEaaaaaaaaaalxaxxxxb
1od0_A_3291od0   A333350WILKKVKEEYNPPEVYITHHHHHHHHHH--S-EEEEaaaaaaaaaalxabbbxa
1p42_A_781p42   A7895EHILSVLHLLEITNVTIEHHHHHHHHHTT--SEEEEaaaaaaaaaalxabbbbx
2dnj_A_1402dnj   A149166DVYLDVQQKWHLNDVMLMHHHHHHHHHH----EEEEaaaaaaaaaalbaxbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1doz_A_1961doz   A     MO6MAGNESIUM ION, 6 WATERS COORDINATED Q - 199
1doz_A_1961doz   A     MO6MAGNESIUM ION, 6 WATERS COORDINATED Q - 221
1ffw_A_151ffw   A     PONIMIDO DIPHOSPHATE S - 15
1ffw_A_151ffw   A     PONIMIDO DIPHOSPHATE T - 16
1ffw_A_151ffw   A     PONIMIDO DIPHOSPHATE R - 18
1jys_A_521jys   A     ADEADENINE S - 76
1jys_A_521jys   A     ADEADENINE A - 77
1jys_A_521jys   A     ADEADENINE G - 78
1p42_A_781p42   A     ZNZINC ION E - 78
1p42_A_781p42   A     MYRMYRISTIC ACID E - 78
1p42_A_781p42   A     ZNZINC ION H - 79
1p42_A_781p42   A     MYRMYRISTIC ACID H - 79
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1e6u_A_2531e6u   A AC2UVW BINDING SITE FOR CHAIN AK - 262

Clusters included in this Subclass
CLUSTER: HE.4.199
CLUSTER: HE.5.86
CLUSTER: HE.6.58